Detail



ID : Ahg949231

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949231|scaffold_801118.1
Sequence
AGATTGGTTC AGTTTGAAAG ATGGGTTATA TGTGTGATTT CTGTGATGAA CAAAGATCAA TGGTGTATTG TCGGGCTGAT GCAGCATGTT TGTGTCTCTC GTGTGACCGT AGTGTTCATT CTGCTAATGC TTTATCGAAA CGTCATTCGC GGACTTTGGT ATGTGAGAGG TGTAATGCAC AGCCAGCATC TGTTCGGTGT AGCGATGAGA GGGTTTCTCT ATGTCAAAAC TGTGATTGGT TAGGCCATGA CGGAAAGAAT TCTACTACTA CTACTTCACA TCATAACAGG CAAACCATCA ATTGTTATTC TGGTTGTCCC TCGAGTGCCG AATTATCCTC GATATGGTCT TTCTTTATGG ATTTGAATAT CTCTTCTTCT GGAGAATCTG CTTGTGAGCA AGGAATGGGT TTGATGACTA TAGATGAAGA TGGCACAGGA GAAAAACCAG GTGTCCCAAA TGTTAATGTA GATCAGCCTG AAACCAGTTC AGCTGCACAA GGTATGGATC ACTCTAGTGT TCCAGAAAAT TCATCATTGG CTAAGGAGCT TGGAGTATGC GAGGATGACT TTAATGGAAA TCTCATTACA GATGAAGTAG ACTTGGCTCT TGAGAACTAT GAAGAACTCT TTGGTTCAGC CTTCAACTCA TCAAGATATC TCTTCGAACA CGGAGGAATT GGAAGTCTTT TCGAGAAAGA TGAAGCTCCT GAGGGCTCAA ACAAAGGAAA CGAAATGCAG CAGCCTGCCG TAAACAATAA TGCATCTGCA GATTCGTTCA TGACTTGTAG AACGGAGCCA ATAATTTGCT ATTCATCAAA GCCTACTCAT TCGAATATAT CCTTCTCTGG CATCACGGGA GAAAGTAATG CTGGAGATTT CCAAGATTGT GGGGCATCAT CGATGAAGCA GCTTTTAAGG GAGCCACAAC CATGGTGCCA TCCAACAGCA CAGGACATTA TTGCTTCCTC ACATGCCACA ACACGTAACA ATGCTGTTAT GCGCTACAAG GAAAAGAAGA AGGCTCGCAA GTTTGACAAG CGAGTGAGGT ATGTCTCTAG GAAAGAAAGG GCTGATGTGA GACGGCGTGT GAAAGGACGG TTTGTCAAGT CCGGTGAAGC TTATGATTAC GACCCAATGA GCCCAACAAG AAGCTACTGA GGATAAGACC CCAAAACAAT G 
Length1181
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10842896.. 10844346
Download Sequence
A.thaliana
AGI-codeAT5G48250.1
DescriptionB-box type zinc finger protein with CCT domain
TAIR curator summary
Alias[BBX8][B-box domain protein 8]
Gene coexpression
MR
MR Locus Description
10.7703 Ahg483782 Mitochondrial substrate carrier family protein
11.8743 Ahg900749 Tetratricopeptide repeat (TPR)-like superfamily protein
12.9228 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
16.7332 Ahg495889
19.799 Ahg479607 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
20.1494 Ahg356828 cold regulated gene 27
22.6053 Ahg325028 KDO transferase A
22.9565 Ahg495112 HCP-like superfamily protein with MYND-type zinc finger
24.1868 Ahg487688 Transmembrane CLPTM1 family protein
24.5561 Ahg912544 Protein of unknown function (DUF1664)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression