Detail



ID : Ahg485080

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485080|fgenesh2_kg.5__1072__AT3G47040.1
Sequence
ATGGAAGGCA GCAATGAAAC ATGCGTTTAC AAGAACCAAG ACGCGCCAGT GGAGGCGCGT GTAAAGGACC TTCTCTCTCG CATGACTCTG CCGGAAAAGA TAGGCCAGAT GACTCAGATC GAACGCGTCG TCACTACTCA TCCCGTCATT ACAGATTACT TCATCGGTAG TGTACTGAAC GGTGGAGGAA GTTGGCCGTT CGAGGATGCT AAGACGTCGG ATTGGGCTGA TATGATCGAC GGTTACCAAA ACGCAGCGTT AGCGTCGCGC TTAGGAATTC CGATCATCTA TGGCATTGAT GCTGTCCATG GCAACAACAA TGTCTACGGA GCCACTATCT TTCCCCACAA CATAGGCCTC GGAGCCACCA GAAATTATTT GAACAAAGTG GTTGTTAAAT GTGATAGAGA TGCAGATTTG ATCAGAAGAA TTGGGGCAGC AACCGCACTT GAAGTAAGAG CGTCTGGCGC TCATTGGGCG TTTGCTCCAT GCGTGGCCGC TTTGAGAGAT CCGAGATGGG GGCGATCCTA TGAGAGTTAC AGTGAAGATA CTGACATTAT TTGTGAGTTG AGTACGCTTG TCTCGGGTCT ACAAGGCGAG CCACCCAAAG AACATCCTAA TGGCTACCCT TTTCTTGCAG GAAGAAACAA TGTGGTAGCG TGCGCTAAGC ATTTTGTTGG AGATGGTGGT ACCGATAAGG GCATAAACGA AGGGAACACC ATTGTGTCAT ACGAAGAGTT GGATTCATCT TGCACCATAT TTGAATTGTC TTGCTCAGGG AAGGGATTTG TCATTTCTGA CTGGGAAGCT TTGGAACGGC TTAGTGAGCC ATTCGGTTCT AACTACCGCA ACTGCGTGAA AACCTCAGTT AATGCTGGAG TCGACATGGT GATGGTGCCT TTCAAGTATG AACAGTTTAT AAAGGACCTC ACAGATCTGG TGGAGTCAGG GGAAGTAACA ATGTCTCGGA TAGATGATGC TGTTGAGAGA ATACTTAGAG TGAAGTTTGT TGCGGGTCTT TTTGAAAATC CTCTGACGGA CCGATCTTTA TTGGGTACTG TTGGCTGCAA GGAACATAGA GAACTAGCTC GTGAATCGGT TAGAAAGTCG TTAGTGCTCC TGAAGAACCG AAAAAATTCT GAGAAGCCAT TTCTGCCACT AGATCGTAAC GCCAAGAGAA TTCTAGTCAC TGGAACGCAC ACGGACGATC TTGGATATCA GTGCGGGGGA TGGACAAAGG CATGGTTCGG TCTAAGCGGC AGGATCACAA TCGGCACAAC GCTTTTGGAC GCCATTAAAG AAGCAGTTGG AGACAAGACT GAAGTGATCT ACGAGAAGAC TCCTTCCGAA GAAACTTTAG CCTCGGTGCA AGGCTTCTCC TACGCCATTG TTGCAGTGGG GGAAACTCCC TACGCAGAGA CATTGGGAGA TAACTCGGAA CTCACAATAC CCTTAAACGG TAACGACATT GTAACCGCGG TTGCAGAGAA AATTCCGACT CTAGTTGTCT TGTTCTCTGG ACGGCCTATG GTTCTTGAGC CGCCGGTTCT TGAAAAGGCT GAGGCTCTGG TCGCTGCTTG GCTGCCTGGA ACCGAAGGGC AAGGAATGAG TGATGTCATT TTTGGAGATT ATGACTTTGA GGGGAAGTTA CCAGTGAGCT GGTTCAAACA CGTTGACCAG TTGCCGTTAA CCGCTGAAGC CAATTCGTAT GATCCATTGT TTCCTCTTGG TTTTGGTCTC AACTACAATT CCGGTGAGAA CTCAAAACCG GTTTTGACTT CACCAGTCTG A 
Length1791
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12409236.. 12412128
Download Sequence
A.thaliana
AGI-codeAT3G47040.2
DescriptionGlycosyl hydrolase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg474912 Integrase-type DNA-binding superfamily protein
9.8995 Ahg477950 HCO3- transporter family
14.4914 Ahg319227 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
14.4914 Ahg482083 Protein of unknown function (DUF1685)
21.0713 Ahg944166 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
26.3818 Ahg923061 NC domain-containing protein-related
30.2985 Ahg489778 calcium ion binding
34.2491 Ahg929239 glucan synthase-like 4
47.7493 Ahg338653 SET-domain containing protein lysine methyltransferase family protein
48.4974 Ahg349113
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression