Detail


ID : Ahg489778

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489778|fgenesh2_kg.6__2912__AT4G08810.1
Sequence
AAAAAGCTTC CATCGATTTC GCAATGAAGG AATCAGATCT AACCACCGAA CCAATCGCTC AGAATCTAAT CAAGCTTATC AGCAATGTCT GTTTCTCAGT CTTCGTCTTC ACAGTTCTCA TATTCACAGT AATTGCCGTC ACTTACCAAC CACCAGATCC ATGGCTTGAA TCTGCTCCAG CTCTCACCAA ACTCCTAACC GAAACCGAAA ACGCATCTTT CAAAATCGAC GGTTCGATGC TCAAAACCGG TGAAGATATC GCTTCTTCTT CTCCGGTTTC AGCTCCGGCG GGGCTAGTTA CGGAGGCGAC GATTGAGAAA TCCGAGGAGA GAATCGGGAA TATGACGGTG AAGAACTCTT CTTCTGATTA TTCTATGGAT TGTGATGATT TGAAGATTGT GAATTGTTCG GATCCGAGAG TTTTAGTTGC TGTTGAAAGG TTTAATTTGA AGGTTTTTAA GTCTATTGTG TTCTTAGAGT ACGAAACTCC GGTTAACGGA TCGAATTTAG ACGAATGCGA TGTTTCGTGG AGGTTTAGGA ATAAGAAGGA GAAGTCATGG AGGAGATATA GAGATTTCAG GAGGTTTAAG TTTGGATTTG GTGAGAATTG TACTTATAAA GTGTTTCATA CTAGTGGTTG GCATTCTGGT GTTAATGCTC GTAGGCCTAG GATTAGACCG AGCTCGAGTA GAGGCGGTGG ACCGAAGGTT GTGCGTGGTG GTGATCCCGA GATTAATGAT ACGATTCCGA CTCTTGGTTC GCAGACGAAT TTCAGGAGAG GGAAGTATTT GTATTATTCG CGGGGAGGTG ATTATTGTAA GGGGATGAAT CAGTATATGT GGAGTTTCTT GTGTGGTTTA GGTGAAGCAA TGTATTTGAA TAGGACTTTT GTTATGGATT TGAGTTTGTG TTTGTCTGCA AGTTATAGTT CCACGGGGAA GGATGAGGAG GGTAAGGATT TTCGGTATTA CTTTGATTTC GAGCATCTTA AAGAAACGGC TTCTATTGTT GAAGAGGGTG AGTTTTTGAG AGATTGGAAG AAATGGAATC GGTCGCATAA ACGGAAAGTT CCTGTAAGGA AGGTTAAGAC GCATAAAGTG TCGCCTTTGC AGCTTAGTAA AGATAAGAGT ACGATTATAT GGAGGCAGTT TGATACTCCT GAACCTGAAA ACTATTGGTA TAGAGTGTGT GAAGGGCAAG CGTCAAAGTA TGTGGAGAGG CCGTGGCACG CATTGTGGAA ATCGAAGAGA TTGATGAACA TTGTCTCTGA GATTAGTGGG AAAATGGACT GGGACTTTGA TGCGGTTCAT GTGGTTAGAG GCGAGAAAGC GAAGAACAAG AAGCTTTGGC CACATTTGGA TGCAGACACA TGGCCTGATG CAATATTGAC CAAACTGAAA GGACTGGTTC AGGTGTGGAG GAATTTGTAC GTCGCCACCA ATGAACCGTT CTATAATTAC TTTGACAAAT TGAGGTCTCA GTACAAGGTT CACTTGCTTG ATGACTACAG CTACTTGTGG GGGAACAAGA GTGAGTGGTA CAATGAGACA AGTCTCTTGA ACAATGGTAA ACCAGTTGAG TTTGATGGAT ACATGAGAGT AGCTGTTGAT ACAGAGGTGT TTTATAGAGG AAAGACTCGT GTTGAAACGT TCTATAACCT TACCACGGAC TGCAAAGACG GGATCAATAC ATGCTGAAAT TGATCAGTCA GGTTGTTGTT ATATGTTTTC ATTGTTTAAT TTGTTTTTGT ATCCTATTCA ATTATGCTTG TGTTGTTACC TTGTGTTCTA CTAGCAATTG AAGAGTGTAC GTAACGTTTA CATTTTTTGA TTCATA
Length1836
Protein Sequence
Protein Residue
Map Locationscaffold_6: 17946098.. 17947961
Download Sequence
A.thaliana
AGI-codeAT4G08810.1
Descriptioncalcium ion binding
TAIR curator summaryCalcium binding protein involved in cryptochrome and phytochrome coaction
Alias[SUB1]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg924243 HSP20-like chaperones superfamily protein
13.2288 Ahg486380 Protein kinase superfamily protein
20.199 Ahg497283 Protein of unknown function (DUF740)
24.3926 Ahg480010 RING/U-box superfamily protein
30.2985 Ahg485080 Glycosyl hydrolase family protein
38.3406 Ahg891409 oxoprolinase 1
39.6863 Ahg492007 NAD(P)-binding Rossmann-fold superfamily protein
39.6863 Ahg945828 FIZZY-related 2
40.5956 Ahg491583 exocyst subunit exo70 family protein G1
41.6173 Ahg478170 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression