| Annotation |
|---|
| Description | jgi|Araly1|485150|fgenesh2_kg.5__1142__AT3G47860.1 |
| Sequence |
ATAAAAGTCT GTGGCGACCA AAAGAAGCGA AGAGAGAGAA TGATATTAAC TAGTATAAGC CTCTCAACAC CAGTTTCTTC TCAAAGGTTC TCTCCACCTC CTGCCACTAC AACGAGGAGA TCTCATTTCT CTGTCACAGT CTGTTCTTCC AGAGGGTTGT TGAAGAATGC TGAGTTAAAA TGTTTCTTGG AGAAGCCAAT TGGAAACCTG TCTTTGAGAA AGCATCTTGT TTCAGGGTTG GCAGCTATTT TGCTTCTCTC TCAGGCAGGC CAGGGTATTG CGTTGGATCT CTCATCTGGT TATCAGAACA TTTGCCAACT AGGGAGTGCT TCTGTGGAAG AAACAAAGCT GACTCTTCCA CTTGACAATG CATCTGATGG TGACTCGGAA GCGATGATGA TGATGATGAT GAGAGGCATG ACTACTAAGA ACTTTGACCC AGTTAGGTAC TCTGGAAGAT GGTTTGAAGT AGCTTCTCTT AAGCGTGGAT TTGCGGGTCA AGGCCAAGAA GACTGTCATT GTACCCAGGG GGTATACTCG TTTGATATGA AGGAATCCGC CATTCGAGTA GATACATTTT GTGTTCACGG CAGTCCTGAT GGATATATAA CAGGAATCAG AGGAAAAGTC CAATGCGTTG GAGCGGAAGA TCTGGAGAAA AGCGAGACTG ACTTAGAAAA GCGAGAGATG ATTAAAGAGA AGTGTTTCCT ACGATTTCCC ACAATTCCTT TTATTCCCAA GTTGCCTTAT GATGTCATAG CCACTGACTA CGACAACTAC GCTCTTGTTT CTGGAGCCAA AGACAAGGGC TTTGTTCAGG TATACTCAAG GACACCTAAC CCAGGACCTG AGTTCATCGC CAAGTACAAG AACTACTTGG CACAATTTGG CTATGACCCG GATAAAATAA AGGATACACC ACAGGACTGC GAAGTGATGT CTGATGGTGA GCTAGCTGCC ATGATGTCCA TGCCAGGTAT GGAGCAAACA CTGACAAACC AGTTTCCAGA TCTTGGATTA AGAAAGTCGG TCCAGTTTGA TCCCTTCACA AGTGTGTTTG AAACCTTGAA GAAACTTGTC CCGCTCTATT TCAAGTAGAG CAGCTTCTTT TGCTCAAATT CTTATGTAGA TGATATAATC ACTGTCCTTA TATACATCTT CCAGAATCAA ACACTCTTCT GATCA |
| Length | 1185 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12854842.. 12856489 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G47860.1 |
| Description | chloroplastic lipocalin |
| TAIR curator summary | Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light. |
| Alias | [CHL][chloroplastic lipocalin] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.2627 |
Ahg944002 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| 17.4069 |
Ahg919118 | NAD(P)-linked oxidoreductase superfamily protein |
| 24.3721 |
Ahg473695 | annexin 1 |
| 28.0357 |
Ahg478641 | phosphoglycerate kinase 1 |
| 34.2929 |
Ahg486691 | |
| 34.7851 |
Ahg325438 | ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 |
| 35 |
Ahg495247 | phosphoglucomutase |
| 43.8862 |
Ahg950897 | D-ribulose-5-phosphate-3-epimerase |
| 45.4313 |
Ahg489749 | stromal ascorbate peroxidase |
| 45.9021 |
Ahg339218 | alpha-amylase-like 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|