Detail



ID : Ahg325438

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325438|fgenesh1_pm.C_scaffold_6000658
Sequence
ATGGAGGAGT CGTCGTCTTT GAAGAAAAAT CTGATGGAGT TAGAAGGGAA GAAGAGTGAG CCTTACCCAG GAGGAATGCC GAAGATGGGT CCATTCACTG GGAGAGATCC GAATGTGAAG AAACCTTCTT GGTTGAGACA AAAGGCACCT CAAGGCGAGA GGTTTCAGGA GGTGAAGGAG TCGCTATCTC GTCTCAATCT CAATACTGTT TGTGAAGAAG CTCAGTGTCC TAATATCGGC GAGTGTTGGA ATGGAGGTGG TGACGGTATA GCTACTGCAA CCATCATGGT TCTTGGTGAT ACTTGTACTC GTGGCTGTAG ATTCTGTGCC GTTAAAACCA GTAGAAATCC TCCTCCTCCT GACCCAATGG AACCAGAGAA CACTGCCAAG GCCATAGCTA GTTGGGGTGT AGACTACATT GTTATCACCA GCGTAGACCG TGACGATATA CCTGATGGGG GAAGTGGACA TTTTGCGCAG ACTGTCAAAG CTATGAAGGC TGTCGACACT CTTGTGCACT CGGGATTGGA TGTTTTTGCT CACAATGTCG AGACTGTGAA AAGGCTCCAG CGACTTGTGA GGGATCCTAG GGCTGGATAT GAGCAGAGCA TGTCGGTTTT GAAACATGCA AAGATCAGCA AACCTGGAAT GATCACAAAG ACATCCATAA TGCTGGGTCT TGGAGAAACA GACGAAGAGT TGAAGGAAGC AATGGCTGAT CTAAGAGCTA TAGATGTTGA TATTCTAACA CTTGGCCAGT ATTTACAGCC AACTCCATTG CATCTGACTG TGAAAGAGTA TGTCACACCT GAGAAGTTTG ATTTCTGGAA AACATACGGA GAATCAATAG GATTTCGCTA TGTTGCAAGT GGTCCACTGA TGACTAACGG TTACGCTCTG TCACCGGCGA TTATCGCCGC CGTTCGTCCT CCGGCATCTC AAGACTGTCT AGCTTCTGCT TCTCTTAATG GACGTAAATC GATCACCTCT TCATCTTCTT CCATCTTCGT ACCTATCTCA TTATCTACTT CCTACGGTCG AAGCAAATGC GGCTTCTCAA TCTCGCGAAA GAATCCAAGA TCGACAATTC GTTGTGATAT TGCTGTGAAA TCGGCAGCTT CTGTCGACGC GGACGCTGAT CTTTCTTCAT CTACGTCATT GGAGACTGAG GAAGACGAGA AGGCGAAGGA GAAGATTGGG GCTAGGGTTA GGGTTACGGT GCCGTTGAAA GTTTACCATG TGGTTCGTGT ACCGGAGGTT GAGTTGATGG GAATGGAAGG TTTTATCAAA GATTACGTCG TTCTTTGGAA AGGAAAGAAA ATCTCAGCTA ATCTGCCGTT TAAGGTACAA TTCGTGAAAG AGATCGAAGG TCGTGGTCCT GTCAAATTCT TCACGCATCT TAAGGAAGAC GAGTTCGAGT TAATTGATCC GTGA 
Length1434
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3172674.. 3175753
Download Sequence
A.thaliana
AGI-codeAT5G08410.1
Descriptionferredoxin/thioredoxin reductase subunit A (variable subunit) 2
TAIR curator summary
Alias[FTRA2][ferredoxin/thioredoxin reductase subunit A (variable subunit) 2]
Gene coexpression
MR
MR Locus Description
9.59166 Ahg493880 ribosomal protein large subunit 27
19.5959 Ahg944002 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
22.8035 Ahg495834
24.7386 Ahg935404 chloroplast chaperonin 10
24.98 Ahg473852 Protein of unknown function (DUF3223)
28.2489 Ahg494014 homeobox protein 23
30.3315 Ahg482500 glycine decarboxylase complex H
30.5941 Ahg474344 RAB GTPase homolog G3D
31.225 Ahg940838 sigma factor 4
31.273 Ahg488618 root cap 1 (RCP1)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression