| Annotation |
|---|
| Description | jgi|Araly1|485222|fgenesh2_kg.5__1214__AT3G48670.1 |
| Sequence |
TTTCTTCAAC CCTAGGTGAA ATAAAGGACG ACCCAAAACA AAACAAGTGA CGAGAGAGGA GAGAGGAGCT TCTTCTTCTG GACACTGAAC AGTGAGCACC CATCTCCAGC CTCTTCCTGA ACAAGATGGG GAGCACTGTG ATTTTGAGCT CAGATGATGA AGATTCAGAT ATTAGTGAAT CTGAAATGGA TGAGTATGGA GACAAAATGT ACTTAAATCT TAAAGGTGGG AAGCTCAAAG TGAGACTCTC TCCTCAAGCT TTTGTCTGTC CTTATTGTCC AAACAAGAAG AAACCTAGTT TTCAATACAA AGATCTCCTT CAACATGCTT CTGGAGTTGG TAATAGCAAT TCAGATAAAA GAAGTGCAAA GGAGAAAGCA AGTCACCTTG CTCTTGTCAA ATACCTTCAA CAGGATCTTG CTGATTCAGC TGTAGAAGCA GAGCCTTCAT CGAAGCGTCA GAAAAACGGA AACCCTATTC AAGATTGTGA TCAGGACGAG AAGCTTGTCT ATCCTTGGAA AGGTATTGTG GTTAATATTC CAACTACAAA GGCACAAGAT GGTCGATCTG CGGGTGAGAG TGGATCGAAG CTAAGGGATG AGTACATTCT AAGAGGATTT AACCCGACTA GAGTTCGTCC TTTATGGAAC TACTGGGGAC ATTCAGGAAC AGCTATTGTG GAGTTTAACA AAGATTGGAA TGGACTTCAC AATGGTCTTT TGTTTGACAA GGCTTATCGA GTAGACGGTC ATGGAAAGAA GGATTGGTTG AAAAAAGATG GTCCCAAGTT AGGTCTTTAC GCGTGGATTG CTCGTGCTGA TGATTATAAC GGTAATAATA TTATTGGAGA AAACCTGAGG AAGACAGGTG ATCTCAAAAC TATAGCTGAG CTTACGGAAG AAGAGGCGAG GAAACAGCAA AAGCTAGTGC AGAATCTGAC ACAACTTGTA GAAGAAAAGA AGAAAGACAT GAAGCAGATT GAGGAGCTTT GTTCAGTGAA GTCAAAGGAA CTTAATCAGT TGATGGAAGA GAAGGAGAAG AATGAACAAA AGCATTACCG AGAGCTGAAT GCTATACAAG AGAGAACAAT GAGTCACATT CAAAAGATAG TTGATGATCA TGAGAAATTG AAGAGGCTGT TGGAGTCAGA GAAGAAGAAA CTCGAAATCA AAGGTAATGA GTTGGCAAAG CGCGAAGTGC ACAATGGAAC CGAGAGAATG AAATTGTCTG AAGATCTTGA ACAGAACGCA TCTAAGAATA GTTCTCTTGA ACTAGCAGCC ATGGAACAAC AAAAGGCAGA CGAGGAAGTT AAAAAACTTG CGGAAGACCA AAGGAGGCAA AAGGAGGAGC TTCATGAGAA AATCATAAGA CTAGAAAGAC AAAGAGATCA GAAACAAGCG ATTGAGCTAG AGGTTGAGCA GTTGAAAGGA CAGCTTAATG TGATGAAGCA CATGGCATCA GACGGCGATG CTGAAATTGT GAAAAAGGTG GAAATCATCT TTAAAGATTT AGGTGAGAAG GAAGGAGAAC TCGAAGACCT CGATAAATTT AACCAAACTC TTATCCTTAG AGAGCGCAGG ACTAACGATG AGCTTCAAGA AGCTCGTAAA GAATTGGTAA ACATTATGAA AGAGTGGAAA ACAACTATCG GTGTTAAGAG AATGGGAGAG CTCGTGACGC AACCGTTCGT GGATGCAATG CAGCAGAAGT ATTGTCAGCA AGATGTGGAG GACAGAGCAG TTGAAGTTCT CCAACTTTGG GAAGGCTATC TCAGAGATCC AGATTGGCAT CCATATAAGC GGATCAAGCT CGAAAATCAA GATAGAGAAG TGGCAGTGAT AGATGATAGA GACGAAAAGC TGAGGGAGCT AAAGGCAGAT TTGGGAGACG GTCCTTACAA TGCGGTCGCA AAAGCTTTGT TGGAGATAAA CGAGTATAAC CCGAGTGGAA GTTATATTAC AACAGAGCTA TGGAACTTAA AAGAAGATAA GAGGGCTACA CTTGAAGAAG GTGTCACTTG TTTACTTGAT CAATGGGAAA AGGCTAAACG CAAGCGTGGA ATGGCTTAAA GCTGCAAGAA GATGGACATG AGACTGAATA AAAAGCCGAT GCGGTTTTTA GTTGCAGAGA AATGTGTTTG GTTTGATTAA ACTTTGGTGG ATTCTGTTTG TTTTTCTTCT CAGAACTTAG GTGAATAATG GACACAACTT TGATGTCTTG CATCGTTTC |
| Length | 2229 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 13227785.. 13230889 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G48670.1 |
| Description | XH/XS domain-containing protein |
| TAIR curator summary | Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. |
| Alias | [IDN2][RDM12][INVOLVED IN DE NOVO 2][RNA-DIRECTED DNA METHYLATION 12] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg481584 | Argonaute family protein |
| 5.2915 |
Ahg486819 | Chalcone-flavanone isomerase family protein |
| 7.68115 |
Ahg472299 | Protein kinase superfamily protein |
| 8.77496 |
Ahg475250 | ATP-citrate lyase A-2 |
| 10.3923 |
Ahg480649 | high mobility group B4 |
| 11.3578 |
Ahg492190 | Ribosomal protein L31e family protein |
| 12 |
Ahg487213 | Shugoshin C terminus |
| 13.6015 |
Ahg492389 | AGAMOUS-like 24 |
| 16.5227 |
Ahg926990 | Thioredoxin superfamily protein |
| 18.412 |
Ahg485200 | alpha/beta-Hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|