| Annotation |
|---|
| Description | jgi|Araly1|480649|fgenesh2_kg.3__3350__AT2G17560.1 |
| Sequence |
TACTCACTCA TACGCTCTTC GTCAAACAAA CAAAAAAAAC CCTACAGAAA CTTCGACATG AAAGGCGGCG AATCCAAAGC TGAAGCTACG AGCACTGATC AGAGACTCAA AACCAGAGGT AGAAAGCCTG GGAAGAAGAC GAAGAAGGAT CCAAATCAAC CTAAGAGACC TCCAAGTGCT TTCTTCGTCT TCCTTGAGGA TTTCCGAAAA GAGTTTAACC TAGCGAATCC GAATAACAAA TCCGTCGCTA CTGTTGGTAA GGCTGCTGGA GCTAGATGGA AGTCTATGAC TGAGGAAGAT AAAGCGCCTT ATGTCGCCAA GGCCGAGAGC AGAAAGACTG AATATCTTAA GACTATGCAA CAGTACAACA TGAAACTGGC TAGTGGAACC AATAGAGGTG AAGAGGATGA CTCTGACAAA TCCAAGTCTG AAGTGGATGA AGCAGGAAGC GAAGAGGTTT TTATGCAGGA GGAGGAAGAC GACGATTGAG GCTTTCTACT AGGTCTTGCG ATTGACTTGA CTCAGATTTG AGAATGTAAA CTTGCTTAGA GATGACCAAA AACTTTAAAA CTGGTTATGC TTTGTGTTTG TGGTATTTGA ACCTCATTTG CTACTTCAAT GTGGTTTTAG GTCAGTTTGT AGGGATAATA TCACTTGACT GCTATATTTT CCCCATTTCA TTGTTTTCAC TAGAATTTAT ATGTTGTTCA ACTTTGGATA AGTGGTATGG TTTTAGTATC AGCTTTATTT CT |
| Length | 752 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 20900523.. 20901874 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G17560.1 |
| Description | high mobility group B4 |
| TAIR curator summary | Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. |
| Alias | [HMGB4][NFD04][NFD4][high mobility group B4][NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg931157 | proline iminopeptidase |
| 2.44949 |
Ahg329621 | Ankyrin repeat family protein |
| 4.89898 |
Ahg483227 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related |
| 6.85565 |
Ahg491117 | tonoplast monosaccharide transporter2 |
| 6.9282 |
Ahg495390 | polypyrimidine tract-binding protein 2 |
| 8.48528 |
Ahg491623 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| 10.3923 |
Ahg485222 | XH/XS domain-containing protein |
| 11.5326 |
Ahg480529 | DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 |
| 24.8193 |
Ahg484793 | ARID/BRIGHT DNA-binding domain-containing protein |
| 26.3818 |
Ahg931973 | Secretory carrier membrane protein (SCAMP) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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