Detail



ID : Ahg485258

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485258|fgenesh2_kg.5__1250__AT3G49000.1
Sequence
ATGGCTATGT CTGAGTTTGG CATTGTCTAC GCCGTCCATA TCATCACCGT CCAATTCGGC TCCGTCGTAT CGAAAGTTTG CGAATGTCTT CTACGTAAAG GACCTCTTTC CTCACGAGAC ATCTCTCGTT TAGCTGAATC AGACATCAAT CATAACCAAG TTAAAGCTAT TCTCTATCTC TTGATTCAGC ACAATTGTGT TCAAGCTTTC TCTATTGAAC CTCCTGATGG TTCCGAGAGC AAAGCAATTG TACAGTATAT TGTGCTGTTT AACAACATTT TGCATCGTGT GAGGTATAAC AAGTTTTCGA GGCTTGTAAA CGAAGAACTT GGCTCTGAGT GCGGTGCAGT TCTTGATGGT TTACTTAGTA ACGGTAGGCT TACCTTGGGA CAGCTGATTG AAAGAGACAG AGGTTCAGGA AAAACGATAG GTTCTGAAGC AATTAGAGAT TCTCTTCAGA AATTGGTTGC TGCCCGTTTT GTTGAGCGCA TTCCTTCTCC CGAACCTGTG CTTGGAAACA AAGAACAAGA GCCGGCAAAG AAAAGAGGCG CTAAAGCTGC CAAGATTCTC AAAGAACCGG AAACCTTGGA GGAACGTGTT GTTGAAGCAG CAACTCCAGT TGACGCAATA AGGTTTCCAC TTATATTCGA AGAAGATGCC AATTCATCTT TAGCAGATGA CGATAGCAAC ATCACTGAGG GGAAGCGTAA ACAACGTGAT GTGGACTCAT CAGATCCGAG CAGTGGAGTA ATTTGGCGTC CTAATTTTGA GGAGTTCATC CACCGCCTTA GACATAAGGC GTGTGTGGAG ATTGTGAAAG AGCGCAGGGA TGAAGGATGT GCCATTGTCT TGAGGGCAAT GTTAGAAGTA GGAAGATCAC AGGAGAAGAA GGTGAAAACA GACAATTCGG CTCCAATGTC AATCGGTTCC ATTTATGAAG AGGTTATAAA GACAGAAGCA GGTCGCACTA TGTTACAAGA GCGAGTTGAA GCATGCCTTG ACCAATTGAG TGCTACGTCT TCTTATCTAC CAGCATTTGT GACAGAAATG AATGATTCAT ACATAGTTGA TTTTAAATCC ATTATCAGCG TAGCACAGAA AGATGAGATA GAAGCAGTAG TTATGAGAAG ATATGGGAAA GAAGCTTTCA GAATGTTCAG ATACTTATCA CAGGAAGGGC GTTTTGTTGA GACCGATAAG ATTGCTGATG CCGCGCTGAC TGAAAAGAAA GACACACCGC AATTCCTTTT GAAGATGTGG AAAGACGGAT ACTTACATAT GCAGAAATTG GCGATCACGG GTACGTATGT ACCGTTTCTG TTGTGGAAGG TAAACAAGTT GATTGTGACT AGGCAAATGT TAGATGAAAT GTATCATGCT TCACTTAACT TGAATCTCAG GTTGGCTCAT GAGTTAGAAT CCGAAAAAGA GTTGCTGATG TTGCCATCAG ATAAACTGGA AGGACCATTA AAGGAGAGAG TGATCAAGGT CAGAGCCAAG AGGCTGTTAC TCTCTTCCAC TATGTTTAAA CTTGATGATG CGATTATGCT ATTTCACGAC TTTTAAACTC TTAAATTGAA AATCATTTCT TTATTTTGTT TTAGTCGATT TAGTTCACAT TGTCCTC 
Length1627
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13396905.. 13399974
Download Sequence
A.thaliana
AGI-codeAT3G49000.1
DescriptionRNA polymerase III subunit RPC82 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg938680 Eukaryotic rpb5 RNA polymerase subunit family protein
4 Ahg317994 KH domain-containing protein / zinc finger (CCCH type) family protein
5.19615 Ahg909381 tubulin-tyrosine ligases;tubulin-tyrosine ligases
7.48331 Ahg488484 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1
11.4891 Ahg476537
12.1655 Ahg919623 Peptidase C13 family
15.1658 Ahg921800 Nucleotide-diphospho-sugar transferases superfamily protein
17.2337 Ahg477121 glyceraldehyde-3-phosphate dehydrogenase of plastid 1
20.7846 Ahg486585 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain
22.4499 Ahg495825 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression