| Annotation |
|---|
| Description | jgi|Araly1|486585|fgenesh2_kg.5__2577__AT3G61140.1 |
| Sequence |
ACGAAACGAA GAACAAACAC TGAAACAAAA ATCTTAGCAG AGAACAAAAA TCCCAAAGCC TAAAAACCCT AATCCCAGAC GAATCAATGG AGCGAGACGA TGAAGCGAGT GGACCGATGA TGGAGATGTG CACTAACGGC GGCGAAGAGA CGTCTAATCG AAGACCTATC ATAAGTGGCG AACCGCTCGA CATCGAGGCT TACGCGGCTC TCTACAAAGG TCGCACGAAG ATCATGCGGC TTCTCTTCAT CGCTAACCAC TGCGGAGGAA ACCACGCGGT TCAGCTTGAA GCGTTGAGGA TGGCTTACGA TGAGATCAAA AAGGGTGAGA ATACGCAGTT GTTTAGAGAT GTGGTCAATA AGATTGGCGG CAGGCTTGGG GATAAGTATG GGATGGATTC TGCTTGGTGT GAAGCCGTCG ATCGTCGTGC TGAACAGAAG AAAGGAAAGC TGGAGAATGA GCTCAGTTCT TATCGGACAA ATCTGATCAA GGAAAGCATC AGAATGGGTT ACAATGACTT TGGAGATTTC TACTATGCGT GTGGTATGCT CGGAGATGCT TTCAAGAACT ATATCCGAAC TCGCGACTAC TGCACTACGA CGAAGCATAT CATTCACATG TGTATGAATG CGATTCTTGT CAGCATTGAA ATGGGTCAGT TTACTCATGT TACAAGCTAC GTGAACAAGG CAGAGCAAAA TCCTGATCCT CTTGACCCTA TTGTTATTGC AAAATTGCGA TGTGCATCTG GATTGGCTCA TTTGGAGCTG AAGAAGTACA AGCTAGCTGC TCGTAAGTTC CTTGATGTTA ATCCAGAACT TGGAAATTCC TATAATGAGG TCATTGCTCC TCAAGATATT GCCACCTATG GTGGACTCTG TGCCCTGGCA AGCTTTGATC GATCAGAATT GAAGGCATTC ATTGACAATA TCAACTTCCG GAATTTCTTG GAGCTAGTGC CTGAAGTGAG GGAACTTATC AACGATTTCT ATTCAAGCCG TTATGCTTCC TGCCTGGAAT ATCTAGCAAG TCTCAAAGCG AATTTGCTGC TGGACATCCA TCTTCATGAT CACGTTGACA CACTCTATGA TCAGATAAGG AAGAAGGCAG TGATCCAGTA CACACTGCCA TTTGTGTCTG TTGATTTGAG CAGGATGGCT GATGCATTCA AGACTAGCGT CTCTGGTCTA GAGAAAGAAC TTGAAGCCTT GATCACAGAC AACCAGATTC AGGCGCGGAT TGATTCACAC AACAAAATCC TCTACGCAAG ACACGCGGAT CAGAGGAATG CAACTTTCCA AAAGGTACTT CAGATGGGAA ACGAATTCGA TAGAGATGTC AGGGCGATGC TGTTAAGAGC CAACCTCCTG AAACATGAGT ATCATGCCAG ATCGTCAAGA AAACTTTGAA ATTGATGACA TCAACTTTTG CTAAACTGAG AGGTAATTTT CAAGGGTGTT TTTTCAAGAT TCGAACAAAA CGAGAAATTG GGCAAGATTA CTTTTTTGTA AGAACCAATA GTGTTTCTAT GAGTCGGTGA CATTTTGAGT AAGTAAAGGT TTTATTCAAA GATGGACAGT CCATTATTAA TCAACTTTTG AACGATATTG CCTTTTAAAT GAGTCTTAGG TAGCATCGCA ATAACTCCAT GCTTACTTAA AACTCACAAA CCATGAAGTT AAGAATCCGC CAAATTTGGA AGATGGGCCA ACTCCATTTA TTTGGGGTTG CATTGGTGAA AGTAT |
| Length | 1745 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 19033429.. 19037141 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G61140.1 |
| Description | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain |
| TAIR curator summary | Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development. |
| Alias | [AtCSN1][ATFUS6][ATSK31][COP11][CSN1][EMB78][FUS6][SK31][ARABIDOPSIS THALIANA FUSCA 6][SHAGGY-LIKE KINASE 31][CONSTITUTIVE PHOTOMORPHOGENIC 11][COP9 SIGNALOSOME SUBUNIT 1][EMBRYO DEFECTIVE 78][FUSCA 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.69536 |
Ahg477703 | endoribonucleases |
| 9.74679 |
Ahg492272 | Cleavage/polyadenylation specificity factor, 25kDa subunit |
| 12 |
Ahg474815 | Plant neutral invertase family protein |
| 12.8841 |
Ahg495758 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| 14.4222 |
Ahg475156 | DNA-binding storekeeper protein-related transcriptional regulator |
| 20.7846 |
Ahg485258 | RNA polymerase III subunit RPC82 family protein |
| 22.383 |
Ahg490272 | |
| 23.2379 |
Ahg928421 | |
| 24.8193 |
Ahg484159 | |
| 27.1109 |
Ahg478935 | RAB GTPase homolog A1G |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|