Detail


ID : Ahg485298

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485298|fgenesh2_kg.5__1290__AT3G49390.2
Sequence
CTTCTATTCT AATCATCTCC TTGAATTTTC CAAGTTTTCT CCTTTTGTCT TTACTTATTT TCCCTTGAAT AAAAATCCAA CTTTTCTTTG TTTCAGTCCT CTCTTGTGCT CTCATTGATC TTTTAATTAA GTTTGATTCT CTCCGTTTAT GGCTTAACCA TTTTCTCAAA TTCTCTTTCT AAGTTTGGTT GTTTTTGATT CAGAAATCGA CGAGTTGGTA AGTTGTTGTT GTCTGATCGT TATAAAGATT CCACCTTTTT GGTCCGATCA TGGCTGTTGC TGAGAATGCT GGTGTCAAAG TGGACTCTTC GTCTGGTCAG AATTTAGACA ACAACACTGA TTCAGCTACC GAGACGAAGC CGCCATGTCC TGATGATGAT CAGAGCCCTA AATCTGACTC ATCGAATCCT CCTACCATCG ATTCGACTCC AGAAACTGAC GATCGGATCA ATGAGACTGC TCAAGAGGGT CAGACTTTAA ATGGGTTTAA CAGAAATGGT GAGAGAGATA ACAATGGAGA GATCAAAGAT TTGGCTGATG CTTTTTCTAA GCTTAATCCC ATGGCTCAGG AGTTTGTTCC TCCTTCTCTC GCTCGAAGTC AATCTGGGGT TTTCAGAAAT GGATTAGGGT TTACTAACAA TTTTGCAGCC CCACCTAAAC TTGCTGATGG GAATGATCAT TTTCCTACAA GGAGAAGGAG TTTTGGCCAA GGGAAGCGAA GAATTAACAA AAGAACAAGC TTGGCTCAGA AGGACGATGT AATCAGGAGA ACTGTATATG TCTCCGACAT TGACCAACAG GTTACCGAGG AGAACCTCGC AGGTGTCTTT ATTAATTGTG GACAGGTTGT TGATTGTCGT GTATGCGGTG ACCCAAATTC TGTCCTTCGT TTTGCTTTCA TTGAATTTAC CAATGAAGAG GGAGCTAGGG CTGCTTTGAG CATGTCGGGT ACTGTGCTCG GTTTTTATCC TCTTAAGGTT CTTCCTTCCA AAACCGCTAT TGCCCCTGTT AACCCAACTT TTCTTCCAAG ATCTGAGGAT GAGCGTGAGA TGTGCGTTAG GACTGTTTAC TGTACCAACA TTGACAAGCG GATCACTCAA ATTGACTTGA AAGGCTTCTT TGAAATGCTT TGCGGGGAGG TTCATCGTCT GAGACTTGGA GACTATCACC ACCAAACCCG TATTGCTTTT GTTGAGTTTG CGATGGCGGA AAGTGCAATT GCTGCGCTTC ACTGCAGTGG TATTGTCTTG GGGGCACTCC CAATAAGGGT AAGTCCATCA AAGACACCAG TAAGGCCGCA CTTTCCCCGC GCTGATTTCA AGTGAAATGA TCGCGAAAAA ATGTCAAATT ATATAGCAAA CGAGAGAGAG AGAGAAAGCA GAAGAAGATG AAGTCTAAAG AAGAAGGTAC TTGAGGCGTT TTGTGTTTAT ATATAAACTC TTTTTAGATC TATTTTAAGT TATGCTTCGC GGTCGCAGAG CCTGCCCGGT ATCTTTGAAC AACTCAAGAA CTTTGGTCTA AACTTTCTCC TTTCTATAGT CACCAAAAAC AAAAAAAAAA AAAAAATTGG ATTATTTTTG TTGTTGTTGA AATTGAGTTA CCCTTTGGAT ATTTTTTTAT GAATTATTTA AGACATTTGG TGAAATTTTT TAATTTCAGT TAGATC
Length1666
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13730997.. 13734618
Download Sequence
A.thaliana
AGI-codeAT3G49390.1
DescriptionCTC-interacting domain 10
TAIR curator summaryRNA-binding protein, putative, RNA-binding protein RBP37, Arabidopsis thaliana, PIR:T04196.Member of a family of PAB2 domain containing proteins.
Alias[CID10][CTC-interacting domain 10]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg477517 Protein phosphatase 2C family protein
13.7113 Ahg932476 Protein kinase superfamily protein
14.9666 Ahg322489 P-loop containing nucleoside triphosphate hydrolases superfamily protein
16 Ahg478095 CONSTANS-like 9
18.8944 Ahg485582 dual specificity protein phosphatase (DsPTP1) family protein
22.5167 Ahg482233 DCD (Development and Cell Death) domain protein
24.7386 Ahg494587 Calcium-binding EF-hand family protein
31.4643 Ahg473945 calcium-dependent lipid-binding family protein
32.4962 Ahg913673 Protein kinase superfamily protein
42.6615 Ahg487152 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression