Detail


ID : Ahg485755

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485755|fgenesh2_kg.5__1747__AT3G53670.1
Sequence
CTTGTCTCAG ATTAGCTTTG TAATAATATC TAGCTGGGTT TCCTGTAATT TCTCGTCCGG ATTCTTGTTA CCATGATTCG GCTATAGTGT TTGTGCCTCT GATTGATTGT CCCAAGCATC GTTCTTTACT GATTTTTAGA GGTATCTCTG AGATCTGTCT CTGCGATTCG TCGGATTTGA TTAGGGTTTT TTTTTTTTGT TTTGGATTTC TTCTTCTAGG GTATCGAAGA GGATAGAGAA AATGCGGGTG TCCTCTGAGA TACTCCTTCT TTCTTTGGTT CCGGCGTTGA CTTTTTATCA TTCTGGTTTG AGTTCTAATC GTTTGAAACC TCTTCAAAAG AGTGATTGGC GTGGTAATCT TAGTTAAACA AAGATTTCTC TGTTTTTCAA GTTTCTCTTC GGTTTCGTTT CTTCTCACGC ATTTCCTATC TCGAAGAAGA ACAAGCTTTT GATCTCTTTC TTCGGACATT TTAGTCAGTA ACCAATCTTT CGACATTTCG GCTGCTCGAG TTACTTTTGG ATATGAGCTC TGCCTGTGGT GGGTTGGATT TCAAAGATGC AGAGAGCGGC TCTGCTTCCA GTCCCAATAA ATGTTCTAAT GGCTCATCAA AGCATATCTC TTGTCTCGGA TCTGAAGATG CTCAAGAGTC TGATGGTGAT GATAGTGGTT ATATACACCA ATATGTGATT GAAGATTCCA AAGACAAGGC GATCAGTGAG CCCATCCTTG AGTCTTTACC TCTTGAGTCT TTGGATGATG AAAGTGAAGA TAAGAACCTT GCATCCGCAT TGCAAGACAT GTTCTCTGAG AGTATGAGTG TGGTTACTCT GATTCCTGCC ATTAAAGGTG GTCGAGAGAA GCATGGCAAG TCACTCGAGA AGCTGAGAGT GTCATGGGCT GAAGATGTGT ATGATCCTCC ACCTTCCATT GTCTCTCACA CAAGAAGCAA GAAACAGCAA CCGCAGAAAT CAAAGAGCAA AGACAACCTG AAGAAGAATG GAAAGAAAGG ACAAAAGGGA AGCAGCCATT CCCGTGGCAG CAAAGACAAG AAGCAGATTT CTTCTCGCAG CAGCAGCAAA TACAGTCGTG ATAAGTTTGA TTGGGCAACA CAAATGTCTG TTCTAGCTGC GTCTTCTTGA ATCTGTGTAG CATCACCAAG GCACTTGCGT CTTCCGTACT CTTTTCTCTC TCACTCTCTC TT
Length1202
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15773777.. 15775510
Download Sequence
A.thaliana
AGI-codeAT3G53668.1
Descriptionconserved peptide upstream open reading frame 51
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF51 represents a conserved upstream opening reading frame relative to major ORF AT3G53670.1
Alias[CPuORF51][conserved peptide upstream open reading frame 51]
Gene coexpression
MR
MR Locus Description
2 Ahg938862 multiprotein bridging factor 1B
11.0905 Ahg473178 receptor-like kinase in flowers 1
11.8322 Ahg489590 glutathione synthetase 2
18.6548 Ahg489545
20.2731 Ahg920262 Protein of unknown function, DUF647
20.7846 Ahg336243 K+ uptake permease 10
23.3238 Ahg902467
25.4558 Ahg322459
28.6182 Ahg327720
28.9828 Ahg939245 SET domain protein 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression