Detail



ID : Ahg473178

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473178|fgenesh2_kg.1__3132__AT1G29750.2
Sequence
GATTTATCAT TTTCGATGAG ACATTGATTT ACAGAGATAT TTTTGTTGCA ATGATATCTC TGTATCAAAT GTTGGCCGAG AAGAAGAAGA AGAAGAAGAA GAAAGATGTT AACATCTTTG CAATTTTTGT TTTTGCCATC ATCTGCTTCA AATTTTACAG TATTAATGCT ATCAAATTAC CGCAGCAAGA AGTCGATGCT CTGCAACAAA TCGCAACCAC ATTGGGATCG AAATTCTGGA AATTTGATGC TGAAAATTGT AAGATTGAGA TGGTGGGGTT AACTGAAACT CCTCCTCCAA CAGCTAAGCA AGAAATAGAA TGTGAATGCA GTCCCACTAA CGACACTGAT TGTCATATTG TGAAATTTGC ATTCAAGGAG CATAATCTTC CAGGAACTCT TCCTCAAATA GTCAAGCTTC CCTACCTTCG GGAGATAGAC TTGGCCTACA ACTACATCAA TGGGACCTTA CCTCGTGAAT GGGCTTCTTC AAATTTGACT TTTATCTCTC TTCTTGTGAA CCGGTTGTCA GGGGAAATTC CGAAAGAGTT CGGAAACTCT TCTACACTAA CATATTTGGA TCTCGAGTCA AATGAGTTTT CTGGAACTAT TCCTCAGGAG CTTGGGAACT TAGTCCACTT GAAAAAACTG TTGCTTTCCT CTAACAAATT GACGGGAACT TTGCCAGCTT CACTAGCTAG ACTACAGAAT ATGACAGATT TCAGGATTAA CGATCTTCAA CTAAGTGGAA TGATACCTAG TTACTTACAA AATTGGAAGC AACTCGAGAG ACTTGAAATG ATTGCATCTG GTCTCACTGG TCCAATCCCA TCGGTCATCT CAGTTCTGAG CAATCTTGTT AATCTGAGGA TCAGTGATAT ACGTGGACCA GTCCAACCAT TCCCTTCGTT GAAGAACGTG ACAGGTTTAG TTAAACTTAT ATTGAAGAAC TGTAACATTT CTGGACAAAT TCCTACTTAT CTTTCAAATT TGAAGGAGTT GGAGACACTG GATTTGAGTT TTAACAAGTT GGTTGGGGGA ATTCCGTCGT TTGCACAAGC AGAAAATTTA CGGTTTATAA TTTTGGCTGG TAATATGCTC GAGGGAGATG CTCCAGATGA ATTACTAAGA GATGGAATCA CACTAGATCT TTCATATAAC AATCTGAAGT GGCAGAGTCC TGAAAGTCGT GCTTGTCGCC CAAATATGAA TCTGAATCTA AACTTGTTTC AGAGCACTTC GACAAAAAAA TCGAGCAAAT TTCTGCCGTG TATCAAAGAT TTCAAATGTC CTCGATATTC TAGCTGCTTG CATGTGAACT GCGGTGGAAG CGATATATAT GTAAAGGAGA AAAAAACAAA AGAATTATAT GAAGGAGATG GAAATGTTGA AGGTGGTGCT GCTAAGTATT TTTTGAAGCC TGACGCTAAT TGGGGATTTA GCAGTACAGG GGACTTCATG GACGACAACA ATTTCCAAAA CACTAGATTC ACCATGTTTG TCCCGGCATC TAACCTGTCT GATCTCTACA AATCGGCACG AATAGCTCCA GTATCTCTAA CTTACTTCCA TGCCTGCCTG GAAAATGGAA ACTACACTAT AAATCTGGAC TTTGCTGAGA TGCGGTTCAC CAATGATGAA AACTATAGCC GGCTTGGAAG GCGTCTGTTT GACATTTACA TTCAGGAGAA ATTAGTGGCA AAGGACTTCA ACATCATGGA TGAAGCAAAG GGAGCTCAAA CACCTATAAT CAAACCATTT ACTGCCTATG TGTCAAACCA CTTTTTAACC ATCCGGTTGA GTTGGGCCGG TAAAGGAACT ACCAGGATTC CCACTAGAGG GGTTTATGGT CCTCTCATAT CGGCTATTTC CATAGTTTCA GATTCTAAGC CGTGCGAACG TCCGGAAACT GGAATGAGCC CTGGAGCATA TATTGCAATT GGAGTTGGAG CACCATGCCT TATTATCTTT ATAGTGGGAA TTCTGTGGAT GTGTGGCTGC CTCCCAAGAT GTGGTCAACG ACGAAAAGAT CCCTATGAAG AAGAGTTGCC TTCTGGAACT TTTACATTAA GGCAAATTAA ATTTGCTACA GATGACTTCA ATCCAACTAA CAAGATTGGA GAAGGTGGTT TCGGTCCAGT GTTTAAGGGT GTGTTAGCAG ATGGAAGAGT TGTAGCAGTC AAGCAACTCT CATCTAAATC GAGACAAGGG AACCGAGAAT TTCTAAACGA GATAGGCGCA ATTTCTTGTC TTCAACATCC AAATCTCGTC AAGCTTCATG GCTTCTGCGT TGAGCGGGCT CAGCTATTAC TGGTGTACGA ATACATGGAA AATAACAGTT TATCTAGCGC GTTATTCAGT CCAAAGCATA AACAGATTCC AATGGACTGG TCTACTAGGT TTAAGATTTG CTGCGGGATC GCAAAGGGTC TCGCGTTTCT CCATGAGGAA TCACCGTTGA AGTTTGTACA CAGAGACATT AAGGCCACAA ATATTTTATT GGACAAGGAT TTAACTCCCA AGATATCTGA TTTCGGATTG GCTAGGCTTG ACGAAGAGGA GAAAACACAC ATCAGCACCA AAGTCGCCGG GACTATAGGA TATATGGCGC CAGAATACGC ACTGTGGGGT TACTTAACTT TCAAAGCAGA TGTCTACAGT TTTGGTGTTT TGGTTCTAGA GATCGTCGCT GGCATAACCA ACAGTAATTT CATGGGGGCA GGAGATTCCG TTTGCCTCTT GGAATTTGCT AACGAGTGCG TAGAATCAGG GCACTTGATG CAAGTAGTGG ATGAGAGATT GAGGCCTGAA GTGAACAGAA AAGAAGCAGA GGCGGTTATA AAAGTGGCTC TCGTGTGCTC GAGCGCTTCT CCAACAGATC GTCCTATAAT GTCAGAGGTC GTTGCTATGC TCGAAGGTCT ATATCCAGTG CCAGAATCAA CCCCAGGAGT AAGCAGGAAC TCAGGGGATA TAAGGTTTAA GGCGTTTAAA GATTTAAGGA GAGGCATGGA GAACAATAGT AAGACGCAGT GTTCTGTTAA AAGTTATCCG TCTTCTTCTT CGTCTTCGTC TGGGGCAGGA CAAGTAGTTC AAGAAAGAAA GAAAGAAGAG TCAAGGTCTT GAAGTGATAT CCAATTCCTT CCCTCTCTTT TTTTTTGTAA AATGTTTATG AGTTCATTCC ATGATTAGTC ATTTACAGTA ATTCCCCATA TTTGTATTTA GGTTCTTTTA GTTGGGGATT GAATGTTGT 
Length3249
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12435690.. 12442365
Download Sequence
A.thaliana
AGI-codeAT1G29750.2
Descriptionreceptor-like kinase in flowers 1
TAIR curator summaryReceptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.
Alias[RKF1][receptor-like kinase in flowers 1]
Gene coexpression
MR
MR Locus Description
4.12311 Ahg489499 D111/G-patch domain-containing protein
8.77496 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
11.0905 Ahg485755 conserved peptide upstream open reading frame 51
15.1658 Ahg486235 Cysteine proteinases superfamily protein
16 Ahg490906
16.1245 Ahg487051
17.5784 Ahg895570 proline-rich spliceosome-associated (PSP) family protein
18.7083 Ahg486112
21.3542 Ahg316186 Sec14p-like phosphatidylinositol transfer family protein
22 Ahg325380 RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression