Detail



ID : Ahg485794

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485794|fgenesh2_kg.5__1786__AT3G54000.1
Sequence
TCGTCTTCTA GTGTTTTTTA TTTTCTGTTA TTTTCGCCTG AGACTGGGTC CCTGAGAATT TCACAAAACT CATTATTGAA ACTTAACAAA ACAGCAACCT CCGTTATTAA AGTTCCCTCC TCCTCGATTT CCGTGGAAAA TCACACTTTT AACCATGGAA CCTAGTAGCG TAATCGACGA TGCTGAGTTT TGGCTTCCGC CGGAGTTTCT CACTGACGAT GATTTTCTCG TTGAGAAGGA GAATAACGGT GTTGGAATCG ATGACTCTTT GTTCCCGTAC GAGCCTCGTC ATGGATTTGG CTCTACCGTT AAGCCTAACA CGGTGAAGAA AGACGACGAG GAGAGTTTCT TAGCCGGATT GACTCAGCAG ATGGTTAAGT CTTCTCTAGA AGATGATTTC TCCGGTGGAT TTTGCGGTAA TCACGCTTTT CCGGCCGCTA ACGACAACAA GGCGTGGGGA ATGAATCGTC CGTCTCTGTG TGTCGCCGGA ACTGGCTGTT GTTGCCGGAA TCAGCGATTG AACCAGAACT CCAATTCGCG AGTTTCTTCA TGGGATCTGT ACTGTGCCGC AGAGAGGATG AGTATCAACG ACGAACCGTA CCATACTGGT AGAGGACTTC TCGGTCCTCC CACAAAACAT TCCTCCGTCG CCGCCGCCGT CAAAAACCAC TCCAACAACG GCACCGGTTA CTACAACAAC CATCAATCTC TCCAATACCA GAAGCTACAA GCTATCCAGT TTCAGCAGCT AAAGCAGCAA CAGTTAATGA AACATCATCG CCAATTGGTG CATCAGAGCA GAGGAGTAAT AGTTAATGGC AACAAAAATG TTGGTCCAGT GAATTTGTCG TCTTCTGCAT GGTCTAATCA GCTTCCGAGG CGTGAAGTTA TGAGAGCTGT ATTCATCGGA GACCATACCG GAAAACGTGG CTCAACAGGA ACCGGCGTCT TCTTACCTCG AAGCGTTAAC CATACTTCAA GAACTGAGAC TCGCGAGAAA CCCACTATAT CGACAGTTTT GGTTCCGGCT AGATTGGCTC AAGTCCTGAA TCTGAACTTA GGCGAACCGG TCCGGTCTTC GACAAATCTC AACGATGTGT CGTGGAGACA GAGGAGCAAC AATGGTGGGT TCTCGAGCCA GATGCACGGT GGCGCAAGGG CGGAGCAGTC AGTGCAAGAG CCTCGGTTAC CTTCGGAGTG GGCTTATTGA CTGATTTTGG TGTTCGTAAA CTTTGGATGT GTTTAGGGTG AAGATTTTAT TGATGATAGG TAGTGAAATA GTGGAAAAAA AGTTAGGGTT TATATAGATA GTGGAAGATT TGGAAGAAGA ATAAAGAAAG TTGCAAGTGT GGAGAGGACG AGGTTTTGGA TCGTTTAACC ACCCATTGAT GGCTGATAGA TGAAGCAAAG AGTTTTTTTG GGTTTTCTTT TTTTACTTGG AAATTAAATG TCAGCCTGTC ACCGGGCTGT TCCTTTAGTG TAATCCCTCT CTCCCTCTCT TTTTGTTCTC ACAACTCTTA AGCAATGGAG AGAGAATTAA ATAAATTAGT AAAAGAAAAG TTAGTT 
Length1566
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15895575.. 15897643
Download Sequence
A.thaliana
AGI-codeAT3G54000.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg495276 MATE efflux family protein
35.8329 Ahg936938 Plant invertase/pectin methylesterase inhibitor superfamily
40.4722 Ahg478720 SKU5 similar 11
50.9411 Ahg945309 Protein of unknown function (DUF1218)
55.4977 Ahg949754 Integrase-type DNA-binding superfamily protein
68.2129 Ahg476818
74.3572 Ahg473940 Protein phosphatase 2C family protein
74.7797 Ahg488212
75.5778 Ahg471409 Integrase-type DNA-binding superfamily protein
76.8765 Ahg945828 FIZZY-related 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression