| Annotation |
|---|
| Description | jgi|Araly1|485820|fgenesh2_kg.5__1812__AT3G54230.1 |
| Sequence |
AAGTTGGATT TGGCCAAGTC CACCACCACC GTGGAGCTCT GAATTCGTCT TTCTTTTTCA ATTTGATTTT TATACGGCTA CTTCATCGCT CGAGCTCTCT CGCTCTCTAT CGATCGCTGC GTATCTGATT TGTCACCGGT TTCAGCTCGT CTCCATCTTC CATTCACTGG TGTCTTTGGT CCGGCGTCTT CGGGGTTGCT TTCAGTTCAT CAGAGGAAAG AGCTTTAAAC ATTGAGGTTT CAATATTCTC TTTGACCATC AAAGATTTGC TTGGTGTACT GGCGGGAAAT GGATCCTAGT CGATATGGTC ATCAGCAAGA ATGGGATAAT AACAGTGCTC CGGAGGGTTT TGGTTCTCAG CACGATCCAA ATCATCGGTT TGGCGTATCA TATGATGAGG GATATCCTGA TGAAAGGTTG ATGCGGGATG ATGTCTACAA TTATCCACCT GGGCATAATA CTCTGGGTGC CTTGCCTCAA TCTAGAAGGC GAAACTATGA AGAAAATTAT CATCGTGAAC ATCGCAGGCA AGAAAAGCCT TACATCGATT CAAATTATGC TGCTGACTAT TATCACGATA GTGAAGCTGG GAGTCGTAAT GGATATTACC GTGATCATGA ACACGAAAGG TCGTCCCGAT ATGATGGCCG CGATGACTAT TCTTGTAACG ATAATAACTA TAGATCTAGA AATTACCATC ATAGCAGAGA TGATGGTCGT GAAAAAGATT ATGATTATTC TCGCCGGAGT TATGATTCTG ATTATGAAAG AGGCAGTGTA AGAGATGGCA GTCGAAAGAG CCGTGATACG CAGGATAGAG AACGGAATTC ACGAGATAGA GAATGGGACT CACGTGATAG GGAGTGGGAC AAAAGATGTT TCAGCCGCGA AAGAGATGAG AGTCCTCATA AGAGATATGA GAAATCACGA TCTCGATCTA CCGGACGTGG TGAGTTCTCT AGATCAAGAT CTCCTAGAGG TCGGAGCCAT GGGCGGAGTT ACCGGGAGGA CAGCTATGAG GGGGATCACT GGAATGAAAG TGAGAGGCGA AGAGAATATG AAGATAGACA TGACCAGGAT CATTTTTCTG CTACCCCATC CGCCACTGTT GTTGTGAAGG GTCTCTCGAT GAAATCAACA GAAGAAGATC TATACCAGAT TCTGGCTGAA TGGGGTCCTT TGCATCATGT TCGTGTGATT CGGGAGCAAA ATTCTGGGAT TTCTCGTGGA TTTGCTTTTA TTGATTTCTC CACTGTGGAT GCCGCACGCA CCATGATGGA TAGACTTGAG CATGATGGTA TAGTTTTGGA TGGAAGGAAG CTAAGTTTCC ATTACAGCAG CCAACCTATT GGTAGGGCTG GTGTGTCCCG TAGGCAGGAA CATGCTTCTA GACACAGTTA TGGTGGAAGT CGAAACATGA TAGTTCCCAC AGATTGGATC TGTACAATCT GTGGCTGTAT CAATTTTGCG CGGCGAACCT CCTGCTTTCA GTGTAATGAA CCAAAGACCA AGGATTCTCC TTCAGCTGAT GTAGGTTTAT CAAACTCAGC ACCAGGAAAA CGAATTTCTG AGACAGGTCC AACTCATGTC CTGGTTGTAC GTGGGTTGGA TGAAGATGCT GATGAGGAAA TGCTTCGGTA TGAATTTTCC AAACATGCTC CTATCAAGGA TCTTCGTCTT GTGAGAGACA AATTCACTCA TGTTTCACGA GGATTTGCAT TCGTACATTT CTGTTCGGTT GAGGATGCTA CTAAGGCACT TGAAGCAACA AACGGAACAG CTCTTGAAAG GAATGGTAAA ATTCTTAGAG TTGCATATGC AAAGAGTGTT CATGGTTCTG GAACTGGTAT ATCAGCACCC TCTCACTCCA ACAACCTCGC TGCTGCTGCA ATTGAAGCAG CAACATTTTC GCAACAGTAT GACGGTGTTG GATGGGCTCC AAAGGAATAC AATCCTGATG AGAAACAAAC CACTGGATGG CAGGCCCAGG GTGTTGGGGA AATTGAATCC CAGAAAGGAA CTTCTGCTCC ACAGTCTGGC TATGTGTGGG ATGAAGCATC TGGTTATTAC TATGATGCGG CTTCTGGATA CTACTACGAT GGAAATTCAG GTCTTTATTA TGACAGCAAT AGTGGGCTTT GGTACTCGTA TGACCAGCAA ACGCAACAAT ACGTTCCTTG TCCTGATCAG AACAATGAGA GTAAATTAAC AGAAAACCAA CCAGACTCTG CCAAGAAGGA GAAATCCAGT CAACAAAAAG TTATTATCTC GGCGGCTACT ACCCCTAATG TAGAAAAAGC TCTGTCCTTA CCAGATGCGG TTCAGGCGGC TGCAGCGGCA GCAATTGCAT CAGAGAAGAG AGAGAAAGAG AGAGTGAAGG AGATAAAACT TGCGTCAAAG ACTAGCCTAC TGGCTAGCAA GAAAAAAATG AATAACGTTT TAACAATGTG GAAGCAGCGG AGCCATGAAA CCCAAATACA ACGTCCCTCA CCCTCACTTG TTGACAATCC ACCTACAGTT CTGGCTGAAG CGAGGTCGTC TTTCTCCACT GGACAATCCA TGGAAAAACT GAAATCTGAT GTAATTATTG CGAAGGAGAG GAGTAATTCC AATCATGGAG TTTCTGCTCT GACAACTGCA GAAAGCTCGA GCAGCAGTAC AACAGGAGGA CCTTTGATGG GGGTGATGAG AGGTTCTTTT GGAGGAACTG TGGGAGGAGC TTCTTCTTCA GCTAGTGTAC AAGTGCCGCC AGTTTTACCT TCTGCTTCTT CAGTTTCGGC TCCGGTTTCA GTTTCCGGGA GTGGGAGAAG AAGGTTCTCT GAAAAACCGA CTGCAGTGCC TACTCACAGA GAACAGCCTC AGACATCATA CAGGGACCGT GCTGCAGAAA GAAGAAACTT ATACGGCTCA TCAACTTCAA GTGGAAATGA TGTTATTGAT TCAAGTGAGG ATTTAATGGG GTTGAGGAAA GGTTCATTGG ATCCAACACC TTTTCCTCCT GGTGTGGGTG GACGTGGGAT TACAACAACC ACCGAAGTCA GTAGTTTCGA TGTGATTACA GAAGAGAGAG CAATAGACGA GAGTAACGTG GGAAACAGAA TGCTGAGGAA CATGGGGTGG CATGAAGGAT CGGGTTTGGG GAAAGACGGG AGCGGAATGA AAGAACCGGT GCAAGCACAA GGCGTTGATA GGAGAGCAGG ACTTGGGAGT CAGCAGAAGA AAGTTGATGC TGAGTTTGAG GTTCAGCCTG GTGACACTTA CAGAACTCTT CTCCATAAGA AAGCACTTGC GAGGTTTCGT GACATGTCTG ACAATAATTG ACTGTTTCTG TGTGTAAAGT CAGTTAGAAA TGTTTTTTGA AGGTTGTGTT CAAACTGTGA AAGTGATTTT GACTTTGTTC TTTCAAGTCT TTTGTTGAAT TATTATTATT AATAAAAAGA GACGGATTAA |
| Length | 3450 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15986338.. 15992762 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54230.2 |
| Description | suppressor of abi3-5 |
| TAIR curator summary | Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3. |
| Alias | [SUA][suppressor of abi3-5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg892895 | Splicing factor, CC1-like |
| 6.32456 |
Ahg490579 | SEC7-like guanine nucleotide exchange family protein |
| 8.06226 |
Ahg945962 | calcium-dependent protein kinase 15 |
| 9.53939 |
Ahg475810 | HEAT repeat-containing protein |
| 10.3923 |
Ahg491509 | Protein kinase superfamily protein |
| 10.5357 |
Ahg491411 | nuclear poly(a) polymerase |
| 13.2665 |
Ahg485789 | proteasome inhibitor-related |
| 13.8564 |
Ahg928727 | subunit of exocyst complex 8 |
| 16.5227 |
Ahg900935 | conserved peptide upstream open reading frame 7 |
| 19.6977 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|