Detail



ID : Ahg900935

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900935|Al_scaffold_0004_1585
Sequence
ATGGGTTCTA CTTCTCAAGA GATACTGAGG AGCTTTTGCT CTAACACGGA CTGGAACTAT GCTGTGTTCT GGCAACTTAA ACACCAAGGA TCTCGAATGG TACTTACCTT GGAGGATGCT TACTATGACC ATCATGGGAC GAATATTCAT GGAGCACATG ACCCCCTTGG GTTAGCTGTG GCAAAGATGT CTTATCATGT CTATTCTCTA GGGGAAGGGA TTGTAGGACA AGTCGCAGTT TCTGGAGAAC ACCAATGGGT ATTCCCCGAA AATTATGACA ACTGTCACTC AGCATTTGAG TTTCATAACG TTTGGGAGAG TCAAATTTCT GCTGGAATTA AGACCATTCT TGTAGTAGCT GTTGGTCGAT ATGGAGTAGT GCAGCTAGGC TCTTTGTGTA AAGTTAATGA AGATGTGAAT TTGGTGAATC ATATGCGACA TTTATTTCTG GCACTTAGGG ATCCATTGGC AGATCATGCA GCAAATTTAA TGCAATGTAA TATGAACAAT TCGTTGTGTC TGCCAAATAT GCCTTCTGAA GGCTTACATG CCGAGGCTTT CCCTGATTGC TCTGGAGAAG TTGACAAAGC TATGGATGTG GAAGAATCCA ATATTTTAAC TCAATACAAA ACTAGAAGAA GTGATAGCAT GCCTTACAAT ACTCCTTCGT CATGTCTTGT CATGGAGAAG ACAGCTCAAG TTGTTGGTGG TCGTGAAGTG GTGCAAGGAT CTACGTGTGG GAGCTATAGC GGTGTTACAT GTGGCTTTCC AGTTGACTTG GTTGGTGCCA AACATGAGAA TCAAGTAGGT ACAAATATAA TCAGTGATGC ACCTCATGTG GGAATGACTA GTGGCTGCAA AGATCCAAGA GGATTAGATC CTAATTTTCA TAAGTATATG AAGAATCATG TGCTCAATAA TACAAGCTCA TCTGCTTTAG CAATTGAGGC TGAAAGATTG ATAACAGGCC AATCATATCC AGGCCTGGAC TCAACTCTTC AGGCTATGTC GAGAACAGAT AAAGAAAGTT CTTATCAAAA CGAAGTATTC CAACTATCGG AGAACCACGG AAATAAAGAC ATAAAAGAGA CTGACCGTAT GCTGGGGAGG AACTGCGAGT CTAGTCGATT TGATGCTTTG ATGTCATCTG GTTATACTTT TGGTGGCAGC GAGCTACTAG AGGCGTTAGG CTCTGCTTTC AAGCAAGCGA GCACTGGTCA GGAGGAGCTA CTGAAGTCTG AACATGGTTC AACAATGAGA CCAACAGATG ATATGAGTCA TAGCCAGCTG ACATTTGACT CTGGCCCTGA GAATCTTCTA GATGCTGTGG TTGCTAATGT GTGTCAAAGC GATGGTAATT CCAGGGATGA TATGTTGTCG AGCAGATCGG TACAATCATT GCTTACCAGC ATGGAACTTG CAGAACCCTC AGGTCAAAAG AAGCATAATA TTGTTTACCC AATTGATAGT GCTATGAATC AGCTACCACT TGCAGAGGTG GATATCCAAC AAAATTCATC AGATATCTGT GGAGCATTTT CTTCGATTGG GTTCTCATCT ACGTATCCCA GCTCCTCTAG TGATCAGTTT CAGACATCCC TGGACATGCC CAAGAAGAAC AAAAAGAGGG CCAAGCCTGG TGAAAGTTCT CGACCTCGCC CAAGAGACAG ACAACTCATT CAGGATCGAA TCAAGGAACT TAGAGAACTT GTACCTAATG GAGCTAAGTG CAGTATTGAT TCTTTGCTCG AACGCACGAT CAAGCACATG CTCTTTTTGC AGAATGTTAC TAAGCATGCT GACAAGCTCA GTAAAAGTGC TAATGCAAAG ATGCAACAAA AGGAAACTGG TATGCAAGGT TCAAGCTGCG CAGTGGAGGT TGGAGGCCAT CTTCAAGTAT GCTCGATCAT CGTGGAGAAT CTGAACAAGC AGGGGATGGT GCTCATCGAG ATGTTATGTG AAGAATGTAG CCATTTTCTT GAGATAGCAA ACGTGATTAG GAGCTTAGAC CTCATCATCT TAAGAGGAAT CACCGAGACT CAGGGCGAGA AAACATGGAT ATGCTTTGTA ACTGAGAGCC AAAACAGCAA AGTAATGCAG AGGATGGACA TTTTGTGGTC TCTGGTGCAA ATATTTCAAC CAAAGGCCAA TGGCAAGCTG TAG 
Length2163
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14076194.. 14080050
Download Sequence
A.thaliana
AGI-codeAT2G31280.3
Descriptionconserved peptide upstream open reading frame 7
TAIR curator summary
Alias[CPUORF7][conserved peptide upstream open reading frame 7]
Gene coexpression
MR
MR Locus Description
16.5227 Ahg485820 suppressor of abi3-5
19.3649 Ahg471912 Family of unknown function (DUF572)
24.3721 Ahg355578
24.6171 Ahg919779 branched-chain amino acid transaminase 2
24.9199 Ahg493967 nodulin MtN21 /EamA-like transporter family protein
25.0799 Ahg942853 TMPIT-like protein
26.7208 Ahg950171 small ubiquitin-like modifier 2
30.7896 Ahg482430 multidrug resistance-associated protein 2
33.4963 Ahg943129 Copper amine oxidase family protein
34.0294 Ahg473931 Glutamyl/glutaminyl-tRNA synthetase, class Ic
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression