Detail



ID : Ahg485860

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485860|fgenesh2_kg.5__1852__AT3G54560.1
Sequence
AACCAGATTT CGTTTCTTTC GTCCTTTTTT TTTTTTTTGC ATTCTCTCGT CGTCGTCTCA AGATCTAGAA GAAGGAAACA GCAATTTGAA GCGACATGGC AGGCAAAGGT GGAAAAGGAC TCGTAGCTGC GAAGACGATG GCTGCTAACA AGGACAAAGA CAAGGACAAG AAGAAACCCA TCTCTCGCTC TGCTCGTGCT GGTATTCAGT TTCCTGTGGG TCGTATTCAC AGGCAACTCA AGACCAGAGT TTCCGCACAC GGCAGAGTTG GTGCAACTGC TGCTGTTTAC ACGGCATCAA TCCTGGAGTA TCTAACTGCT GAAGTTCTTG AGTTGGCTGG AAACGCTAGC AAGGATTTGA AAGTGAAGAG GATCACTCCG AGGCATCTGC AGTTGGCTAT CAGAGGAGAT GAGGAGCTTG ACACACTCAT CAAGGGAACG ATTGCCGGAG GAGGTGTGAT CCCACACATC CACAAGTCTC TGATCAACAA AACCACCAAG GAGTGATTGT GTTTCTTTAG TCTTGGACTC ATTTTCCTTT TCCCTTTTCT TAGTTCTTTG ACTAGTGTTG ACCTCTTCTG GACATCCTCA GGTGTACATT AGTTAATTTG AACTCTTTAG GTTTCTTTTG TTCAAGCAAA TGTTCTCTTT GAATGCTATT GTGATTTGCT T 
Length671
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16126969.. 16128372
Download Sequence
A.thaliana
AGI-codeAT3G54560.1
Descriptionhistone H2A 11
TAIR curator summaryEncodes HTA11, a histone H2A protein.
Alias[HTA11][histone H2A 11]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg920750 Pathogenesis-related thaumatin superfamily protein
9.27362 Ahg472662 MLP-like protein 423
9.59166 Ahg482818 glycerol-3-phosphate acyltransferase 6
13.1909 Ahg497532 Histone superfamily protein
13.2665 Ahg315978 chromomethylase 3
13.4164 Ahg930445 topoisomerase II
14.7986 Ahg477690 Li-tolerant lipase 1
15.2971 Ahg494222 Pectin lyase-like superfamily protein
15.8745 Ahg351411 HXXXD-type acyl-transferase family protein
16.1245 Ahg491350 Vacuolar import/degradation, Vid27-related protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression