Detail



ID : Ahg485932

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485932|fgenesh2_kg.5__1924__AT3G55110.1
Sequence
GCTAACTTAT ATACAAACAA AAAAATATGG CTCCTGAAAG AAGATAACTG AAATTTTAAC AAGTAAGGGT TTCCACATGT ACTACACTGT TTAGCTTCAT CTTCAAGAAT ACACCGTTAA ACTGCCGTCA ACCAAAAAGA GTTAACTTAA TCGTTAAAGA TGCCACGTGT TTCGGCGGAA ATTTTAGATC TCTCTCTCAC CGGCGGCAAC CAATCACCGA CGCTTGCCGA ACTGCTGAAA GATTTCAACG ACAGTGGCCG GAAAAAATAT CCCGGCGAAA ATGCTCCGAC TCATCACATC TTGGATCTCG CTCCCGCGGC TGAAACACGA TCTGTGCCGT TTCTCTTATC CTTCAACAAT CTCAGTTACA ATGTCGTACT TCGCCGGTGG TTTGATTTCT CCCGACGAAA GACCGCTTCC GTGAAGACTT TACTCGATGA TATTACAGGT GAGGCTTGTG ACGGAGAAAT CCTCGCCGTT CTGGGTGGAA GCGGAGCTGG AAAATCCACT TTGATAGACG CATTAGCCGG AAGAGTGGCG GAGGATAGCC TGAGAGGCAC GGTAACTCTA AACGGAGAGA AAGTTTTGCA ATCTCGATTG TTGAAAGTGA TCTCGGCGTA TGTGATGCAA GACGATCTTC TTTTTCCGAT GCTCACCGTC AAAGAAACCC TAATGTTCGC TTCCGAGTTT CGTCTCCCGA GAAGTTTGCC TAAATCGAAG AAGATGGAGC GTGTTGAAAC CCTAATTGAT CAATTAGGGC TTAGAAACGC GGCGGATACG GTAATCGGAG ATGAAGGACA CCGTGGAGTC TCTGGCGGAG AGCGACGGCG CGTGTCAATC GGGATTGATA TCATCCACGA TCCTATCCTC CTCTTCCTCG ACGAACCAAC GTCGGGGTTA GACTCCACCA ATGCGTTTAT GGTGGTGCAG GTTTTGAAAC GAATTGCGCA GAGTGGCAGT ATTGTAATTA TGTCGATTCA TCAACCTAGT GCTCGTATCA TTGATTTGCT TGATCGGCTT ATTATCTTAT CTCACGGGAA GAGTGTGTTC AATGGATCAC CGGCTAGTCT TCCTTCGTTC TTCTCCAACT TTGGTCGTCC CATTCCGGAG AAAGAGAACA TCACAGAGTT CGCACTTGAT GTAATTCGAG AACTTGAAGG ATCCTCTGAA GGAACAAGAG GTTTAGTAGA GTTCAACGAA AAGTGGCAAC AGAACCAATC TGCTCGAGCC ACAACACAAA GTGGCGTATC TCTTAAAGAA GCCATCACTG CAAGTGTTTC TAGAGGGAAA CTAGTCTCAG GCTCATCTGG AGCCAATCCT GTTTCAATGG AAACAGTATC TTCATACGCA AACCCGCCAT TGGCGGAAAC ATTTATCTTA GCCAAACGGT ACATAAGAAA CTGGATCCGC ACGCCGGAGC TTATAGGAAT GCGGATCGCT ACTGTCATGG TGACCGGTCT TCTCTTAGCC ACTATATATT GGAGGCTTGA CAACACTCCA AGAGGTGCAC AAGAGAGAAT GGGCTTCTTC GCGTTCGGTA TGTCCACCAT GTTCTACTGT TGTGCGGACA ACATCCCTGT TTTTATCCAA GAACGATACA TTTTCTTGAG AGAGACAACG CACAATGCAT ACAGAACATC TTCATATGTC ATATCTCACG CCCTTGTGTC CCTGCCTCAG CTACTTGCTC TCTCCATTGC ATTTGCTGCA ACGACATTTT GGACTGTTGG TTTGAGCGGC GGGTTAGAGA GTTTCTACTA CTACTGCCTC ATAATCTACG CAGCCTTTTG GTCTGGTTCC TCCATTGTTA CTTTCATATC CGGTCTTATT CCGAATGTCA TGATGAGTTA CATGGCCACT ATTGCCTATC TTTCCTATTG TTTACTGCTG GGTGGATTCT ACATCAACCG GGATCGGATA CCGTTGTACT GGATATGGTT TCATTACATT TCGCTTCTCA AGTATCCCTA CGAGGCTGTC CTAATCAATG AGTTTGATGA CCCGTCTCGT TGTTTTGTTA AGGGAGTCCA AGTATTTGAT GGTACGCTTT TGGCGGAAGT CCCCCATATG ATGAAGGTTA AGCTTCTCGA TACACTGAGT AGCTCTTTAG GAACCAAGAT AACAGAGTCC ACATGCTTGA GAACAGGGCC TGACTTACTT ATGCAGCAAG GTATAACTCA ATTGAGCAAG TGGGACTGCT TGTGGATTAC GTTAGCTTGG GGTCTCTTCT TTAGGATCTT GTTTTACTTT TCCTTGCTGT TCGGGAGTAA GAATAAGAGG ACGTGAAGGT AGTCCACAAG CACAAAAACA TACAACAAAC GCATATAATA TACGTTGTTG TAGTTTTGTA ATCAAGTTGT AACATCTATA ATTTTGTATC ATCATGGGAA TATTGTAAAA GGATTTTTTC TTAAAATCCA TAGTATCATA ATTACTCTAG TATACGATTA GATTTCAACA TATGACTCAG TTGAAGTTAT TTAATGTAAA TAT 
Length2493
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16366897.. 16369735
Download Sequence
A.thaliana
AGI-codeAT3G55110.1
DescriptionABC-2 type transporter family protein
TAIR curator summary
Alias[ABCG18][ATP-binding cassette G18]
Gene coexpression
MR
MR Locus Description
2 Ahg924488 glycosyl hydrolase 9C2
2.82843 Ahg901436 FASCICLIN-like arabinogalactan protein 16 precursor
3 Ahg315143 flavin-monooxygenase glucosinolate S-oxygenase 2
3.16228 Ahg313693 UDP-glucosyl transferase 78D1
4.58258 Ahg485020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
5.47723 Ahg481373 HXXXD-type acyl-transferase family protein
7.34847 Ahg476341 O-acyltransferase (WSD1-like) family protein
7.87401 Ahg920474 prephenate dehydrogenase family protein
8.94427 Ahg495659 FASCICLIN-like arabinogalactan 1
8.94427 Ahg488487 O-acyltransferase (WSD1-like) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression