| Annotation |
|---|
| Description | jgi|Araly1|485973|fgenesh2_kg.5__1965__AT3G55460.1 |
| Sequence |
AAGAGCTTAG GGTTCACTTT AGATCTGTCT TTGAACAATG CTACTCTCAA GTGACCAAGC AACTCCGTCG CAGGTGATGA GGAGATACAG TCCGCCTTAT TACAGTCCTC CAAGGAGAGG ATACGGTGGT CGAGGTAGAA GTCCTCCTCC TCCTCCACGA CGTGGATATG GTGGGGGTGG TGGTGGTGGT GGACGTAGAG GATCTAGCCA TGGAAGTCTC TTGGTTCGTA ACATTCCTCT TGATTGCAGA CCTGAAGAGC TTCGTGTGCC CTTTGAGAGG TTTGGACCTG TGAGAGATGT CTATATCCCC AGAGACTATT ACTCAGGGGA ACCGCGGGGG TTTGCTTTTG TGGAGTTTGT TGATGCATAT GATGCTGGGG AGGCTCAAAG AAGCATGAAC AGGAGAATAT TTGCCGGAAG AGAGATAACT GTGGTTGTTG CTTCAGAGTC TAGGAAAAGG CCCGAAGAGA TGCGTGTGAA GACTAGGACT CGTAGCAGGG AACCTTCAGG CTCCAGAGGT CGTTCTCATG GACGGTCTCG TTCACGTTCA ATCTCTCGAT CACGCTCTCC TCGTCGTCCA TCAGATTCTA GAAGCAGATA CCGATCAAGG TCTTACTCTC CTGCACCAAG ACGAAGAGGA GGTCCTCCTC GTGGAGAAGA AGATGGAAAA TACAGTCGCA GGTCCTATTC CCCTGGTTAT GAAGGTGCTA CTGCTGCTCC AGATCGGGAC AGAAATGGAG ACAATGAGAT CAGAGAAAAA CCGGGCTATG AAGCAGAGGA TAGACTTCGT GGTGGAAGAG CAGTTTCAAG GTCGCCATCG GGATCCAGGT CCAGGTCTGT GGAGGTATCT CCAAGATGAA ACATGTGTCA AGAAGCCGAC CAAAACATTA TGCAACGCTT TATGGGTATT GCCTCTGTTG TTTCTCTAGT AGTGGTCTCT GTGTCTTTAA AAACTCCGTC GTGTGATGTG ATGTTACTTG AAATCGTACT CGGTTTATGG GTCTTATTTT GAAGTTGTAT GAAGATTGGT TATGCTTTTG ATGTGAGAAA CGTTTAAAAC CCACAATGGT CGAGTA |
| Length | 1076 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16522564.. 16523832 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G55460.1 |
| Description | SC35-like splicing factor 30 |
| TAIR curator summary | encodes an SC35-like splicing factor that is localized to nuclear specks. |
| Alias | [At-SCL30][SCL30][SC35-like splicing factor 30] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg487918 | Cystathionine beta-synthase (CBS) family protein |
| 11.7473 |
Ahg923873 | Class I glutamine amidotransferase-like superfamily protein |
| 13.4164 |
Ahg895753 | HSP20-like chaperones superfamily protein |
| 27.55 |
Ahg495412 | HSP20-like chaperones superfamily protein |
| 27.7489 |
Ahg932616 | Serine/threonine-protein kinase Rio1 |
| 29.5804 |
Ahg928461 | HEAT SHOCK PROTEIN 89.1 |
| 31.4643 |
Ahg935276 | Sas10/U3 ribonucleoprotein (Utp) family protein |
| 33.7639 |
Ahg470503 | Helicase protein with RING/U-box domain |
| 34.8712 |
Ahg495982 | RAN binding protein 1 |
| 35.1141 |
Ahg945215 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|