Detail



ID : Ahg935276

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935276|scaffold_403264.1
Sequence
ACCTGCTCTG CAACACAACA ATGGGGAAAA AAGGAGGGAC TTTGAAGAGA AGTAGCAAAA GCACAAAAAA CCGCAAAGAT ATCGTCGAAG ACCAATACGA TGACGAGATT GACGCCTTTC ATAAACAGAG GGATATAGTT CCCTTGGATG TTAATGATGA TACTGATGAA TCGGATGAAG ATGATGTGCA ACCTGTTTTT GATTTAAAGG GTGTGGATGA TGAAAGTGAG GAGGATGAAG AAGATACAGA AGACGAAGAG GAGTCCGAGA ATGGACTTAC TGCCAAAATG ATTAGGCAGA AGAAATATCT AAGGGCAAAG TTTGGTGATG GTGACGATGA AATGGCTGAT GATGATAAGG ATAAAGATGA GGAAGAGAAA AGGAGCACAT GGGGCGGAAG AAGTGGCTTA TACCATAGTG GTGATAATGT GGATTTTGAT CTCCAATCAA GTGATGATGA AGACCTTAAA GCGGAAGAAG AGGAGGTGAT AAGACTACGG AGAGAACAAC TTGGATCCAT TACAGCAGCT GATGCTGGGT TAGACGATGA TAGTGAAGAA GAGAGTGACA GAGAATTAAC CATGGAGGAA ATTTCTGACA AAGGAAAGCA GGCTACAAAA TCTATCACAG ATAAGAAAGA GAAGGATGAC AAGGACACAC ATGTTGAAGA GATCAAGAAA GACATCAACT CTTTGTCAAA AGAAGAGCAA ATGGATGTAG TATATAGTTC TGCTCCGGAA ATAGTTGGTC TTTTGTCTGA GTTGAACTAT GCAGTCGAAG AGCTTGAGAG TAAGATAAAT CCTGTTTTGA GTAAGTTAAA GGAAGGAGAA CTTTCGTTGA ATGGTGGAAC AAGGTACCTG GAGGTTAAGC AGCTTCTGCT ACTCACCTAT TGCCAATCTA TAACATTTTA TCTTCTACTC AAGTCTGAAG GGCAGCCCAT CCGTGATCAT CCGGTCCTTG CCCGTCTTGT AGACATCAAA TCTTTACTAG ATAAGATCAA AGAACTTGAT GGAGAGCTTC CCCCTGGGTT TGAAGAGTCC CTAGCGAGAA GTATTGCTAA TGGAACAGTG CAAAAGGTGG TTAAAGAAGA TCAGCTCACT TCACCTGTTT CTGATTCAGT AGATAGAATC ACGCAAGACA CAGCCGAGCC AATGAAAATT GATGGAGCAA GAGAAGAAAA GAAGAAAAAA GGAGAGAAAC GCAAGCACCA GCAGAATGAT CAGGTTGATG TGCAAAGTGA GGAAATGTTA AAACTTCGAG CAGCTCTAGA GGGAAAGCTT AGAAGCAATG GAGTCCTTGG TTCTACTGTT TCAAAGTCTG ATAAAGCTCA GAAACGCCAG AAATTAGCTA ATAGGAAGCT AGAGACATTC GATGATTATG TGGATGATGC AGACAATAGC ACACATAATG TAACAGCTGA TAAGCTCACC AAGCTTGTGT CCACCAAACG GAAGCCCAAG ACTGTTTCTG GAGATGATGA TTTACCACAA AGGGATGATA TTGGAGAACG GCGTAGAAAG TTTGAGCTCA GAGTTTTGGC TGGAGCTGGT GTGAAGTCAT CAGAGGGAGA TGGCAGGAAT GAAAATGGGG CATTTGCATC AGATGATGAC AATGATATCG ATGGTGGTAA CAATGACATG GTTGATAATG ATGGTGAATC AGAAGGCTCA GAAGATGAAT TTTACAAACA AGTGAAACAG AAACAAGAAG CTAAACGAGC TGCTAAAGCA GAGATCTATT CAAGGAAACC ACATTTGATC CCGTCATCGC CAGAACGCGT GGATGGAAAA CGACATATTT CAAATCAGAT TATGAGTAAC AGAGGATTGA CCCGACATCG CAACAAGGAC CTTAAAAACC CGAGAAAGAA GTATCGGAAT AAGCACGAGA AAAAAGTCAT TGATCGCAAA GGACAGGTCA GAGATATCCG GAAACAAACA GGTCCATATT CAGGAGAAAC TCGCGGTATC AATCCCAACA CAAGCAGGAG CATCCGAATC AAGAACTAAC CTCCTCTTCT TCCTATGTCC CCC 
Length2033
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20266337.. 20270101
Download Sequence
A.thaliana
AGI-codeAT2G43650.1
DescriptionSas10/U3 ribonucleoprotein (Utp) family protein
TAIR curator summary
Alias[EMB2777][EMBRYO DEFECTIVE 2777]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg487455 ubiquitin activating enzyme 2
9.38083 Ahg478024 GTP-binding family protein
10.3923 Ahg486447 LETM1-like protein
11.7473 Ahg478926 cobalt ion binding
12.2474 Ahg494098
12.49 Ahg496396 DEAD box RNA helicase (PRH75)
12.9615 Ahg471063 Translation elongation factor EF1B, gamma chain
14.4914 Ahg318448 P-loop containing nucleoside triphosphate hydrolases superfamily protein
14.8324 Ahg473739
15.0333 Ahg332525 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression