Detail


ID : Ahg486050

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486050|fgenesh2_kg.5__2042__AT3G56110.1
Sequence
TTCACACTTA CGGATCCAAA CCTCTCGGCC AAATCAGCTG CACCAAACCT CACGCGCCAC CGCGATGGCA ACTCCACCGA CGCTACCTGT CACCAATCAG CAAGCAGTTC AATCTCAGCC ACCAATCAAC ACACCTGCTT TTCGTACTTT CTTCTCACGT CTCTCTACCT CGATCCGTGA TGGCTTGTCA CAGCGTCGTC CATGGACGGA GCTCATCGAT CGGAGTTCCA TGGCTCGACC TGAATCTCTC ACCGATGCCT TGTCCCGGAT CAGGAAAAAT CTCGCTTACT TCAAGGTTAA CTACGTCGCA ATCGTGTCGC TCGTGCTCGC CTTTTCGCTT TTCTCTCATC CTCTCTCCCT CCTTGTCCTC ATCGGACTCC TAGGTGGTTG GATGTTCCTC TACCTCTTCC GTCCCTCAGA TCAGCCACTG GTCATCTTCG GTCGCACTTT TTCTGATCGA GAGACTCTAC TTGCTCTGGT CTTGTCTACG ATCGTCGTCG TGTTTATGAC GAGCGTTGGA TCTCTCTTAA CCTCCGCGCT TATGATTGGC GTAGCAATCG TTTGCGTGCA CGGTGCGTTT GTGGTTCCGG ATGATCTCTT CATGGACGAT CAAGAGCCTG CGAATGCTGG ATTACTCTCA TTCCTTGGAG GTTCTGCTAC CTCAGCTGCT GCTGCTGTCT CAGGGAGAGT TTAAGAGCTC GATTTGATTC AGATCTCTTC AATCGTGGTT GGTAACTCCG TACTGATTCT AGGGATTTGG TGTTGTTGAA TTGAATGTAG ATTCGTAACA AAGCTCTACA GATTTAGAAT TACGAGTTTT TGGTTGCAAT ATCTGCTTCT TCTTGCGTTG TTTTATCTCT TTGGTGGCTC GACACTTTTA TGTTCAGATG TAGAGAACTC AAAAGTTGAT CTTTCTCTAT TGGTCTCCTA TTGTGGGATT CACTGTTAAA TTTCCATCTC GCTTAAATTG GTTTGTTCTC TTGTTTCC
Length988
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16823217.. 16824239
Download Sequence
A.thaliana
AGI-codeAT3G56110.1
Descriptionprenylated RAB acceptor 1.B1
TAIR curator summary
Alias[PRA1.B1][prenylated RAB acceptor 1.B1]
Gene coexpression
MR
MR Locus Description
7.87401 Ahg950185 ATPase, V0 complex, subunit E
10.6771 Ahg889422 Adenine nucleotide alpha hydrolases-like superfamily protein
11 Ahg496605
15.4919 Ahg495986 Selenoprotein, Rdx type
16.7033 Ahg916356 Protein of unknown function (DUF567)
16.9706 Ahg918854 GRF1-interacting factor 2
22.9783 Ahg924520 translocase of outer membrane 7 kDa subunit 2
24.2487 Ahg921879 VQ motif-containing protein
24.6982 Ahg475305 Adaptor protein complex AP-1, gamma subunit
26.533 Ahg319240 RNA polymerase I-associated factor PAF67
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression