Detail



ID : Ahg319240

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319240|fgenesh1_pm.C_scaffold_3002256
Sequence
ATGGTGCCGG ATTCGGTGAA ATCGTTTGTG GTACACATGT ACAGACACAT AAGGGATAAG AACGTGTACG AGATCCACCA GATGTGTGAG ACATCGTTCC AGAGCATATC GGAACGTCTG TTCAAGGAGA CGCCATGGCC AAGTGTGGAA GCCATAGCTC CATACGTAGA CAACGACCAT GTGTTCTGTC TTCTGTACCG TGAGATGTGG TTTCGACATT TGTATGCGAG GCTATCTCCT ACGTTGAAGC AGAGGATTGA TTCTTATGAT AACTATTGCA GCCTCTTTCA GGTGGTGTTG CATGGGGTAG TGAATATGCA GTTGCCGAAC CAGTGGTTGT GGGATATGGT GGATGAGTTT GTCTACCAGT TCCAAAGTTT CTGTCAGTTC AGAGCAAAGC TCAAGAACAA AACAGAGGAG GAGATTGCAT TGCTCAGACA GCATGATAAG GCATGGAATG TCTATGGCGT GCTCAACTTC TTGCAAGCAC TTGTGGAAAA GTCTTGTATC ATCCAAATTC TTGAGCAGGA CAAGCATGGA CTTGAACAGT TCACTGCCAC TGATGGCTAC GATTACAGCG GTGGAAGTAA CGTCTTGAAG GTCCTCGGTT ACTTCAGCAT GGTCGGTCTC TTGCGTGTTC ACTGCCTCCT CGGTGACTAC CACACTGCTC TCAAATGGTT GCAGCCCATT GACATCACTC AGCAAGGTGT TTACACCAGT GTCATTGGAT GCCATATCGC TACCATCTAT CACTATGGAT TTGCCAACCT TATGTTGCGA CGCTATCTAG ATTCTGTTCG TGAATTCAAC AAGATTCTCC TCTACATTTT CAAGACTAAG CAGTACCATC AAAAGTCACC TCAGTACGAG CAATTACTCA AGAAGAATGA GCAGATGTAT GCATTACTTG CTCTTTGCCT CTCCCTCTGC CCTCAACCTA ATCTCGTTGA CGACTCTGTC AGCTCTCAGT TGCGAGACAA GTATGGTGAA AAGATGATGA GGATGCTGAG GTATGACGAT GAGGCCTTTG GTATTTACGA TGAGCTCTTC TCTTATGCAT GCCCCAAGTT TATCACCCCT TCCCCACCAT GTTTAGAGGA ACCTCTTGTC AATTACAATC AGGATGCATA CAGGCTTCAG TTGAAGATGT TCCTTTATGA GGTAAAGCAG CAGCAGCTCT TGTCGGGAGT GCGGACATTC CTAAAAGTCT ACTCCTCCAT TTCTCTTGCT AAGCTCGCAA ACTACATGGA AGTTGATGAG CCCACTCTAA GGACCATATT GTTAACATAC AAGCACAAGA CCCATGCAGT TGATTCCGAT GGTAGGATCA TCTCCAATGC AGACATTGAT TTCTACATCA ACAATGACAT GATCTACGTT GTGGAATCAA AACCCGCAAA ACGTTATGGT GATTTCTTCT TGCGACAGAT TGCCAAGCTT GAAGGTGTGA TAAACGACAT GGATCGTGTC AAACTGGAAT GA 
Length1482
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12312350.. 12314361
Download Sequence
A.thaliana
AGI-codeAT5G25757.1
DescriptionRNA polymerase I-associated factor PAF67
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.3137 Ahg942308 Ribosomal L18p/L5e family protein
13.8564 Ahg478235 Ribosomal protein L10 family protein
20.7846 Ahg887758 cobalt ion binding
21.2132 Ahg487065 Ribosomal protein L4/L1 family
22.7156 Ahg897399
26.533 Ahg486050 prenylated RAB acceptor 1.B1
26.6083 Ahg476667 DNA glycosylase superfamily protein
30.5941 Ahg334590 Phosphoglycerate mutase family protein
31.8434 Ahg473757 ribosomal protein 1
36.2629 Ahg486011 Ribosomal protein L35Ae family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression