Detail



ID : Ahg486062

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486062|fgenesh2_kg.5__2054__AT3G56200.1
Sequence
AAAAAGAAAA GCTTCTTCCC GCCGGCAAAT TCTTAAGTTT CTCCGGCGGT TAGAAAAATG TCACCACAGA TCAAAACTCA TCTCTTGCCT AAGCAAGAAC CTTCGTCGTC TGAGAACCAT GGATCATCAA CCTCCGGCAT CGTTTTCAAC GTGTCTACGA GTATAATCGG AGCCGGAATA ATGTCGATGC CGGCGGCGTT TAAGGTTCTT GGAATAGTCC CAGCGTTTTT GATTATCACG ATCATAGCTT GGCTTTCCAC CATTTCTGTT GGATTTCTAA TGAAATCAAC ACTCGCCGGA GAATCAACTA CTTACGCCGG AGTCATGAAA GAGTCGTTCG GAAAAACAGG ATCCGTCGCT GCACAGATTG CTACGATGGT TGCTACTTTT GGATGTATGA TTGTCTTTTC GATTATTATA GGCGATGTGC TTTCGGGTAA TGAAAATGGA GGATCTCAAC ATCTTGGAGT TTCGCAAGAA TGGTTTGGTT CTTACTGGTG GAACACGAGA ATCTTCGCTT TGTTGTTCAT TTACTGCTTT GTCTTGCTTC CATTGGTCTT GTGTAGACGT GTCGAAAGAC TGGCATTTAG TTCAGCGGTT TCGTTTCTTC TTGCGGTTCT ATTTGTTGTC ATAAGCTCGG TGCTGGCGAT TTCCGCGCTG GTGAATGGAC AAACGAAGAA TCCAAGACTG TTTCCGGAGT TAAGCAATGG AGGATCGTTT TGGAAACTTT TCACAGCTTC CCCTGTTATA GTAACAGCCT TCACGTTTCA TTTCAATGTT CATCCAATTG GATTTGAGCT CAAAGATCCA TTACAAGTGA TCCCAGCAAC TAAGATCTCT GTCATCTTGT GCGCTGCGTT ATACTTTGCA ACTGGACTCT TCGGGTACCT TCTCTTTGGA GATGCAACTA TGTCAGATAT TCTAGTGAAC TTTGACCAGA GCTCTGGTTC TTCCATTGGT TCTCTTCTCA ACGACATTGT CAGACTCAGC TACGCGCTTC ACCTCATGCT GGTCTTTCCT CTCATGAACT TCTCATTGAG AGCAAATCTC GACGAACTCT TGTTCCCCAA GAAGCCGTCC TTGGAAAAAG ACACAAAAAG ATTCATCGGA CTCACTCTGG CTCTACTGAT TTGCTGTTTC TTGTCTGCAA TCGCTGTACC AGACATTTGG TACTTCTTTC AGTTCTTGGG ATCAACCACC ACAGTCTCCA TAGCATTCAT ATTTCCAGCC GCCATTGTTC TAAGGAATGT CCATGGTGTA TCAACCTCAA GAGAGAAGAT CGTAGCTGCG ATAATGCTTG TACTTGCTGT TGCCACTAGC ATTATTGCTA TCTCAACAAA TTTATACAGC CTCGCAGCAA ACTAATGGTT GAAAAAAGTT TTGCAAACAG TCCCCTCCAT GATCACTTCA AACAAATCTG TAAAATTATT AGCTTTCCGT AGCATTCATA TTTATATCTT TGTGAAATAG GTGTGTCACA AATTGCAATG TAATAGCTAT AGGGAGTGCA ATATTTGTTG CTACTTGAAA CAGAGAGAGC AAAAAATGAA CAACTCTTCA AAACTAGTAT TCTTTCAATC ACTTTTTGTA GACCATTATT T 
Length1601
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16856629.. 16858612
Download Sequence
A.thaliana
AGI-codeAT3G56200.1
DescriptionTransmembrane amino acid transporter family protein
TAIR curator summaryEncodes a putative amino acid transporter.
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg945948 APS reductase 3
8.83176 Ahg912233 beta carbonic anhydrase 3
11.225 Ahg919164 Tetratricopeptide repeat (TPR)-like superfamily protein
13.1149 Ahg494872 nitrile specifier protein 5
13.1909 Ahg922779 serine hydroxymethyltransferase 7
16.7332 Ahg485313 response to low sulfur 3
20.567 Ahg494948 Tetratricopeptide repeat (TPR)-like superfamily protein
22.8035 Ahg490118 methionine sulfoxide reductase B5
25.1992 Ahg927205 sulfate transporter 1;2
37.8418 Ahg490342 sucrose synthase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression