Detail



ID : Ahg494948

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494948|fgenesh2_kg.8__764__AT5G48850.1
Sequence
ACACATCTGT ATAATTAATT AAAAAATATG GATAGAAGCT TGAAGAAGAT GAAGAACAAT TACAACAACT CGATAAAGAG CAATCTTATG AAAGATGATG AAATGTTTCA TGTGATTCAC AAAGTTCCTT GTGGAGATAC TCCTTATGTC AGAGCCAAAC ATGCTCAGTT GATAGAGAAG AACCCGGAGA TGGCAATAGT GTGGTTTTGG AAAGCCATCA ACACCGGAGA CAGAGTAGAC AGTGCTCTTA AGGACATGGC TGTTGTAATG AAACAACTTG ACCGTTCCGA AGAAGCCATC GAAGCTATCA AATCCTTCCG TCCTCGTTGC TCCAAGAACT CCCAAGATTC TCTAGACAAT GTCCTCATCG ACTTATACAA GAAATGCGGT AGAATGGAGG AGCAAGTTGA GTTGTTGAAG AGGAAGCTAA GGCAGATCTA TCAAGGGGAG GCTTTCAACG GTAAACCCAC CAAAACCGCT CGCTCTCATG GCAAAAAATT TCAAGTGACC GTTCAACAAG AAATCTCAAG ATTATTGGGT AACTTGGGGT GGGCATATAT GCAACAAGCC AAGTACTTGT CGGCAGAGGC GGTATACAGA AAAGCCCAGA TGGTTGAGCC AGATGCAAAC AAATCGTGCA ACCTTGCGAT GTGCCTTATC AAACAAGGCA GGTTTGAGGA GGGAAGATTG GTTCTTGACG ATGTTCTCGA GTCTAGGGTT TTGGGTGCGG ATGATTGTAG AACAAGGCAA CGGGCCGAAG AGCTTCTGAG TGAATTAGAG TCTTCGCTGC CACGGATGCG AGATGCTGAG ATGGAGGATG TCTTGGGGAA TATCTTAGAC GATGATTTTG TTCTTGGGCT TGAACAGATG ACATCCACTA GTTTTAAATC GAAGAGACTC CCAATCTTCG AACAGATCTC GTCTTTTAGA AATACATTAG TTTGCTAGTT TATTCATTTT GTGTTTT 
Length967
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11591550.. 11593837
Download Sequence
A.thaliana
AGI-codeAT5G48850.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summaryhomologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.
Alias[ATSDI1][SULPHUR DEFICIENCY-INDUCED 1]
Gene coexpression
MR
MR Locus Description
1 Ahg942209 ChaC-like family protein
1.41421 Ahg922779 serine hydroxymethyltransferase 7
2 Ahg490118 methionine sulfoxide reductase B5
3.4641 Ahg485313 response to low sulfur 3
4.69042 Ahg945805
5.47723 Ahg945948 APS reductase 3
5.91608 Ahg935381 beta glucosidase 28
6.48074 Ahg919164 Tetratricopeptide repeat (TPR)-like superfamily protein
7.74597 Ahg946113 FAD-binding Berberine family protein
9.16515 Ahg896301 glutamate-cysteine ligase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression