Detail



ID : Ahg486243

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486243|fgenesh2_kg.5__2235__AT3G57920.1
Sequence
TAAAAGATAG CAACATCTAA AATAAGCAAA ACCACATTTT CGTTCCTCTC TTCTCCTCTG TCCTTTCTAT TTCAAAAGAG AGATGAGCAG AAGCATATCT TTCACTGTCT GAGTAAGAGG AAACCAAACC ATAATGGAGT TGTTAATGGG CTCGGGTCAG GCAGAGTCAG GTGGTTCTTC TTCCACCGAG TCTTCTTCAC TCAGTGGTGG ACTCAGGTTT GGTCAGAAGA TCTACTTCGA GGATGGATCC GGATCCGGAA GCAAGAACCG GGTCAATACG GGTCGTAAGT CGACAATGAC GGCGAGGTGC CAAGTGGAAG GTTGTAGAAC GGATCTAAGC AATGTAAAAG CTTATTACTC AAGACACAAA GTTTGTTGCA TTCACTCTAA ATCATCTAAA GTCATTGTCT CTGGTCTTCA TCAAAGGTTT TGCCAACAAT GTAGCAGGTT TCACCAGCTT TCTGAGTTTG ACTTAGAGAA AAGAAGTTGT CGCAGACGAC TCGCTTGTCA TAACGAACGT CGAAGAAAGC CACAACCCAC AACGTCTCTT TTCACTTCTC GTTACACTCG AATCGCTCCA TCTCTTTACG GAAACCCCAA TGCTGCAATG ATTAAAAGCG TTTTGGGAGA TCCTACGGCG TGGTCAACCG CAAAATCAGT GATGCGGCGG TCTGGACCGT GGCAGATTAA CCCGGAAAGG GAAAGCCATC AACTTTTGAA TGTTTTGTCA CATGGAAGCT CAAGCTTTAC TACATGTCCA GAGATCATAA ACAACAATAG CACAGATTCA AGCTGTGCTC TCTCTCTTCT GTCAAACTCA AACCCAATTC AGCAGCAGCA ACTTCAGACA CCAACAAATT TGTGGCGACC ATCTTCTGGT TTCGACTCGA TGATCTCATT CTCTAATAGG GTTACAATGG CTCAGCCACC GCCCATTTCA ACCCATCATC AGTACCTCAG CCAAACTTGG GAAGTCATGG CGGGCGAAAA GAGCAATTCA CATTATATGT CTCCTGTGAG TCAAATCTCT GAGCCAGCTG ATTTCCAAAT TAGCAATGGC ACCACAATGG GCGGATTTGA GTTGTCTCTT CATCAGCAGG TTCTGAGGCA ATACATGGAA CCCGAGAACA CAAGAGCTTA TGACTCTTCT CCTCAACATT TCAATTGGTC TCTTTGAGTC TAATCTCTTT CACCTTTTAT GATCTTCATC AG 
Length1212
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17610739.. 17612279
Download Sequence
A.thaliana
AGI-codeAT3G57920.1
Descriptionsquamosa promoter binding protein-like 15
TAIR curator summaryEncodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b.
Alias[SPL15][squamosa promoter binding protein-like 15]
Gene coexpression
MR
MR Locus Description
4 Ahg930336
11.0905 Ahg918720 Fatty acid hydroxylase superfamily
12.9228 Ahg350051 glucan endo-1,3-beta-glucosidase-like protein 3
18.8149 Ahg483041 Ribosomal protein L10 family protein
20.9762 Ahg478858
21.8174 Ahg494567 Zinc finger C-x8-C-x5-C-x3-H type family protein
22.7596 Ahg470432 plasmodesmata-located protein 2
22.9783 Ahg477985 Ribosomal L29e protein family
25.4951 Ahg941755 fatty acid reductase 1
25.923 Ahg492160 Aldolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression