Detail



ID : Ahg494567

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494567|fgenesh2_kg.8__383__AT5G44260.1
Sequence
ATCCCACACT TATCTCTTCC AATCTCTCTC TCTTCTTTTG CCACGTAGAC ATGGACGTCG AACATCACAA ATCCGGCCAC ATCAGTAGAC CAACGGTGGA TATTCCACCG AGAAAGCTTC TTTCCTCCGC CAAGTCTCCG TCGTCAGTTT CAAGTCCCCT TCGGAACTAT AAAGAACAGA AAGACTATTG TTACGACTCT GACTCGGAAG ATCCTTACGC CGGAGACCAT TTTCGGATGT ACGAATTCAA GATCCGACGG TGCACGCGTA GCCGTAGCCA CGATTGGACC GACTGTCCTT TCTCGCATCC TGGCGAAAAG GCTCGCCGTC GTGACCCTCG CCGGTTTCAC TACACCGGCG AAGTATGTCC TGAGTTTAGC CGCCACGGCG GTGATTGTAG CCGTGGCGAC GAATGCGGCT TTGCTCACGG TGTTTTCGAG TGTTGGCTCC ACCCGAGTCG TTATCGTACG GAAGCTTGTA AAGACGGTAA GCATTGTAAG AGGAAGGTCT GTTTCTTTGC TCACTCTCCA CGTCAGCTGA GAGTTCTTCC ACCGTCGCCG GAGAATCTTG TTTCCGGTTG CGGTGGATCA CCGTTGTCAT CGCCGGCGTC CGTGTTAAGT ATTAAAAATA ATCGGTGCTG CTTGTTTTGT TCCCACTCTC CGACGAGCAC TCTCTTGGGT TTATCAATAT CACCGTCGTC ATCTCCGCCT TTGTCTCCGG CTGATAAAGC CGCTGCATTT TCACGGCTGA GCCGCCGTCG CACGGCCGTA CTTAACGAAC TGATTAGTTC TTTAGATTCC TTTAGTCTCA CGGAAGCACT CGCGGCCTCT TCCTCGTCTC CCGTTACCAT GCCTACTTCC ACGGCGGCGA TGATCGCTTC ATCCAATCTA AGCAACCACC TCCACCACCG TCTTCCACCG TGGCTTGATG TCGGAGACAG AGATCTCCAA ATACAACAGA GTAGTCCTCC ACAATTTGCT CTTTCCCTTT CTTCTACTCC AAGTTACCTC CATGGCCAGC TTCAACCGCC GCCGTCGAGC TTCTTTAGCG ATGAATTCAC ACCACGCGGT GGCCGGTTAA GCGATTTCAC GGCGGCTGCA GCTGCAGCTG CGGCGGCCAA AGCTAGGGAT AAGAATAGCT TTGAAGTCGG TTCTAGTGGC GATCTTGATC TCGGATGGGT GAACGATCTC TTGACATGAA CAATGTGACG TCAACGGTGA ACATTGTTTA TTGAGAATTG TTAATTTTTA CAATTTTTTC CATGGAGCTA TAATTAAGAG TCTGTACTAT GTCGTGCCTT AAAAATTTTT GTTAAATAAG AGTCTATAAC TTCTATTGTT ATAATATTGA TCTCTTGGAA CTTGTAATAA GTTACTATCC TTGTGATCGA ATTCCTATGT AATGTTTACT TCAAAATATT CTGTTTAATA AAAAA 
Length1435
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3333974.. 3335536
Download Sequence
A.thaliana
AGI-codeAT5G44260.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summary
Alias[AtTZF5][TZF5][Tandem CCCH Zinc Finger protein 5]
Gene coexpression
MR
MR Locus Description
4 Ahg919315 delta 9 desaturase 1
11.8743 Ahg935176 phy rapidly regulated 1
13.0384 Ahg942385
19.5192 Ahg488422 Pollen Ole e 1 allergen and extensin family protein
21.8174 Ahg486243 squamosa promoter binding protein-like 15
22.4722 Ahg481151 Kua-ubiquitin conjugating enzyme hybrid localisation domain
24.5967 Ahg494214 RING/U-box superfamily protein
25.3772 Ahg471329
27.2029 Ahg350051 glucan endo-1,3-beta-glucosidase-like protein 3
28.775 Ahg326421 Exostosin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression