Detail



ID : Ahg486259

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486259|fgenesh2_kg.5__2251__AT3G58070.1
Sequence
TCTCTATTTC TCTCTCTCTA TGGACGAGGC TGCCAGAGAA ACAGAAACTC AAGATTTCAT GAACGTCGAA TCCTTCTCTC AGCTTCCTTT CATTCACCGT CCTAAAGATA AGAACCCTAA ACCCATTCGT GTCTTCGGCA AAGATTTCAC CGGCGGAGGT TTCTCTAGTA CCACCGGTCA AGAAGACTAC TCCGATCCCT ACCAGACCAA AGACAAAGAA GAAGAAGAAG AAGAAGAAGA CCAAACCGGA GATAACAGTA AGGACAATAA TAGCATCAGC AACAACAGGA GATTCGAGTG TCACTATTGC TTTAGAAACT TTCCTACTTC ACAAGCCCTA GGTGGACACC AAAACGCTCA CAAACGCGAA CGCCAGCTCG CCAAACGTGG TGTTCCCTCT TACTTTTATC ATCCTGACAA TAACCCTTAC AGTTACCGTC ATTACCCGTC GTGGACCAGT GGTCCATTAA CAGCGGCTAG GTCCTACGGA GGATATGCTT CTGGTCCTCA GCTGTCGGCG TATTATACAC GACCGAGCTA TGGGAGTCAG TTAGGGCTAT GGCGTCTACC GCCTCGAGTT CAAGGCGTTT ATAACTCAAA CGCAACGTTT ACTAGTAATG GCTCTTCTTC TAATTCGAGT TTACCGTTGT TGGCCGGTTC TCGAACCCAA CTACCATCTC AAGTGGGTGG CTCCGCTGCT CAAAACAGAA TGTCATCGTA CCGGTACGGA TTGAGCTCTA ACTTGCAAGA TCATGTTAGT CTCGATCTTC ATCTTTAAAG ATTTGAAAAC AAATTAAAAC TCGGAGTGTT GTTGAGTGTT ATGTAACTTA GTGAAGGAAA AAATAAGAAA CGGCACGATG TGTAAGATTC AC 
Length872
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17683443.. 17684438
Download Sequence
A.thaliana
AGI-codeAT3G58070.1
DescriptionC2H2 and C2HC zinc fingers superfamily protein
TAIR curator summaryPutative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenile–adult leaf transition and inducing the formation of rosette leaves on inflorescence stems.
Alias[GIS][GLABROUS INFLORESCENCE STEMS]
Gene coexpression
MR
MR Locus Description
27.4955 Ahg480375 arabinogalactan protein 9
29.0517 Ahg470918 syntaxin of plants 111
29.189 Ahg484111
40 Ahg480399 Leucine-rich repeat protein kinase family protein
50.1996 Ahg470432 plasmodesmata-located protein 2
52.5928 Ahg924996 Pectin lyase-like superfamily protein
52.9056 Ahg480193 O-Glycosyl hydrolases family 17 protein
53.6656 Ahg940771 ARMADILLO BTB protein 1
54.0833 Ahg902806 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
56.4447 Ahg490663 ATP binding microtubule motor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression