Detail



ID : Ahg486299

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486299|fgenesh2_kg.5__2291__AT3G58500.1
Sequence
AAAAAGCGAA GAATACGCAG AATCCATCCA ATTTAGGGTT AGGGCTGCCC CTAATCTGGT AACCTGTTCC TCGTCTCTGA TCTGTTTCCC GGATCCGACT AGAAGGAAAG AAGACGACGT CGCACTACCA AAAAGATGGG CGCGAATTCG CTTCCGACGG ATGCAACCCT CGATCTAGAT GAGCAGATCT CGCAGCTCAT GCAGTGCAAG CCTCTCTCCG AGCAACAGGT CAGAGCATTA TGTGAGAAAG CTAAGGAGAT CTTGATGGAT GAAAGCAACG TTCAGCCGGT TAAAAGCCCT GTGACAATCT GCGGTGATAT TCATGGACAG TTCCATGATC TTGCAGAGCT TTTCCGTATA GGGGGAAAGT GCCCTGATAC CAACTATCTG TTTATGGGAG ACTATGTCGA CCGTGGATAT TATTCTGTCG AAACTGTTAC GCTGTTGGTT GGCTTGAAAG TACGGTATCC ACAGCGAATC ACTATTCTTA GAGGAAACCA TGAAAGTCGT CAGATTACTC AGGTTTATGG ATTTTATGAT GAATGTCTGC GAAAGTATGG CAATGCAAAT GTTTGGAAGA TATTTACAGA CCTCTTTGAC TATTTTCCAC TGACAGCCTT GGTGGAGTCA GAAATATTCT GCCTTCACGG TGGATTATCA CCATCAATCG AGACCCTTGA CAACATTAGG AACTTTGATC GAGTTCAAGA AGTTCCGCAT GAAGGGCCTA TGTGTGACTT ATTATGGTCT GATCCTGATG ACAGATGTGG TTGGGGAATC TCTCCTCGTG GTGCCGGATA TACATTTGGT CAGGACATTT CCGAACAATT CAATCACACT AACAACTTAA AGCTGATCGC CCGAGCGCAT CAGCTTGTTA TGGATGGATT CAACTGGGCC CACGAGCAAA AGGTGGTTAC TATATTCAGT GCACCAAACT ATTGCTATCG CTGTGGAAAC ATGGCCTCAA TTCTTGAGGT CGATGACTGC AGGAACCACA CGTTCATTCA GTTTGAACCA GCACCGAGGA GAGGAGAGCC AGATGTAACC CGAAGGACAC CTGACTATTT CCTATGAAGA CACTCAGCTC ATCCTGCAGC TGTAAAGTCC GGTTGTTTGT TTTTGAAGAT CTCTGCTTAT TCCATTTGGT TCAACGCATT TGTGTTCCAG GTTGCTTCTC TTTAAAATCA ATTTAGCCCT CTCCCGTGGA ATAGTGTAAT ATAGGCAAAG AGGTCAATGA ACTTTAAACC TCTCATGAAC ATGTGTTTGG CTGAACTTAT TAGCTCCCTT CTGCATCAGA ATCTGTTTAT TGTGAGATAT TATTTCGATT TATTTCACGT AATTTTTCCC TTTTGTTCC 
Length1359
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17873624.. 17877456
Download Sequence
A.thaliana
AGI-codeAT3G58500.1
Descriptionprotein phosphatase 2A-4
TAIR curator summaryEncodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].
Alias[PP2A-4][protein phosphatase 2A-4]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg890595 ARM repeat superfamily protein
9.53939 Ahg939906 clathrin adaptor complexes medium subunit family protein
16.8819 Ahg496212 PDI-like 1-4
24.5967 Ahg487031 RNA-binding (RRM/RBD/RNP motifs) family protein
34.2491 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
34.4674 Ahg493104 syntaxin of plants 23
42.8952 Ahg943858 vacuolar-type H(+)-ATPase C3
50.7937 Ahg492821 JUMONJI 14
55.7674 Ahg951652 GTP binding
55.9911 Ahg490644 methylthioadenosine nucleosidase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression