Detail



ID : Ahg940290

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940290|scaffold_600834.1
Sequence
GAGAGAGAGA GAGAGAGAGA GAGAGAGAGG ATGTCGTATC TTCTGCCGCA TCTGCACTCC GGTTGGGCTG TTGATCAGGC GATTCTGGCT GAGGAAGAGC GTCTCGTCGT CATTCGTTTC GGCCATGACT GGGATGAGAC TTGTATGCAG ATGGATGAGG TGCTTTCCTC TGTTGCTGAG ACGATAAAGA ACTTTGCAGT CATTTATCTG GTGGACATCA CTGAGGTGCC AGACTTCAAC ACCATGTACG AGCTGTACGA TCCTTCCACG GTCATGTTCT TCTTCAGGAA CAAGCACATC ATGATCGATC TTGGTACTGG TAACAACAAC AAGATCAACT GGGCTCTCAA GGACAAGCAG GAGTTCATCG ATATCATCGA GACCGTCTAC CGCGGTGCAA GGAAGGGTCG TGGGTTGGTG ATTGCTCCAA AAGATTACTC CACCAAATAC CGCTACTAAC CGGGCTTCCC AACACTATC 
Length479
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3117243.. 3118128
Download Sequence
A.thaliana
AGI-codeAT5G08290.1
DescriptionmRNA splicing factor, thioredoxin-like U5 snRNP
TAIR curator summaryEncodes Dim1 homolog.
Alias[YLS8][YELLOW-LEAF-SPECIFIC GENE 8]
Gene coexpression
MR
MR Locus Description
2 Ahg489475 TCP-1/cpn60 chaperonin family protein
2.23607 Ahg478309 cell division cycle 48
2.23607 Ahg494279 RNA helicase, putative
4 Ahg478699 Cwf15 / Cwc15 cell cycle control family protein
4.12311 Ahg941463 E1 C-terminal related 1
5.19615 Ahg471776
5.91608 Ahg475301 pre-mRNA processing ribonucleoprotein binding region-containing protein
6.7082 Ahg495534 Uncharacterised conserved protein (UCP012943)
6.9282 Ahg943470 cullin 1
7.48331 Ahg935879 ENTH/ANTH/VHS superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression