| Annotation |
|---|
| Description | jgi|Araly1|486409|fgenesh2_kg.5__2401__AT3G59420.1 |
| Sequence |
CTCTAGCTCC TACTTTCATT ACCCAATTTC TCTCTCTCAA CACTTCTTTA GTCGGCAAAA AACTTTTGCG AGATTTTTTT TTGAGAAGCT TAGCTTTAAA GGGTCTTTGA GGATGTTATG ATGTTGTTAC CTTGCGGTCT GAGATCTCAA AGGGGTAAGT GTTTTTGTCT TCGTTGCAGA AGAACAGAGA GACAAGAGGT TCTTCTTTGA CATGGTTGTC TGAATTTGCC ACTTCAAGAT TGTCTCCTAC ATCTTCGGAG GTTGTCTGGC TGACGAGTCC TCTGTTTCTT CGACACTAAT TCAGCTCTCA TTGTTTGAAA TTTCAATTCT TTTAGTTATT GCATGCCCTT GATTGCAGTT TCACAGTTTT GTGAACTTCT GGTGACTCCT TTGCTATTTA CCAATCAAGG GTCTCACACT CTTAGTCAAT CTATGGAATG TCTCTGAAAG TGAAGACAGT AGCTAAGAAG CGTGTGGGTT GACTTTGAAA AGAATGAGAA TGTTCGAAAG GAGAGCAAGG GAATGGATTC TCCTTGTAAA GCTTGTGCTT TTCACTAGTA TATGGCAGCT TGCTTCAGCT CTTGGTTCAA TGTCCTCAAT TGCAATTTCC TATGGAGAAG GTGGTTCTGT ATTCTGTGGT CTGAAGTCTG ATGGATCTCA TCTTGTGGTT TGCTACGGAT CGAACTCAGC GATCCTCTAT GGGACTCCTG GTCATCTCCA GTTCATCGGT TTAACGGGTG GAGATGGGTT TATGTGTGGG CTTCTGATGC TATCTCATCA GCCTTATTGT TGGGGAAACA GTGCATTTAT TCAAATGGGA GTTCCTCAAC CAATGACCAA AGGATCTGAG TACTTAGAAG TTAGTGCTGG CGATTACCAT CTCTGTGGTT TGAGGAAGCC AATAGTGGGA AGAAGAAAAG GCAGCAACAT TTCTTCTTCT TCCCTTGTTG ATTGTTGGGG TTACAATATG ACAAGAAACT TTGTCTTTGA TAAGAAGTTA TATTCACTCT CGGCTGGCTC GGAATTCAAC TGCGCGCTGT CCTCTAAAGA CAAGTCTGTT TTCTGTTGGG GAGACGAGAA TAGCAGTCAA GTAATCAGTT TAATCCCAAA GGAAACAAAG TTTCAGAAAA TTGCAGCTGG TGGATACCAT GTCTGTGGCA TTCTTGACGG GTTGGAATCG CGAGTGCTCT GTTGGGGAAA GAGCTTAGAG TTCGAAGAGG AGATCACAGG GACTTCTACG GAAGAACAGA TTCTTGATTT ACCGCCAAAA GAGCCACTCT TGGCAGTGGT AGGTGGGAAG TTTTATGCTT GTGGAATCAA ACGCTATGAT CATAGTGCGG TTTGTTGGGG TTTTTTCGTG AACCGGAGTA CACCTGCTCC TAAAGGTATA GGCTTTTATG ATCTTGCAGC GGGGAATTAC TTCACTTGCG GAGTTCTCTC AGGGACTTCT ATGTCACCGG TCTGTTGGGG TCTTGGTTTC CCTGCTTCTA TCCCTTTAGC TGTCTCACCA GGACTCTGTA TAGACACTCC TTGTCCACCA GGAACTCATG AACTCAGTAA CCAAAACAAC TCGCCTTGCA AAGTGACTGG CTCTCACATT TGCTTGCCCT GTAGTACCAG TTGCCCTCCT GGAATGTATC AGAAAAGCGA ATGCACAGAG AGATCTGATC AAGTTTGTGC TTATAACTGC TCGAGTTGTT CCTCACCTGA CTGCTCCTCA AACTGCTCTT CTTCGTCTAC CAGTGGAGGC AAAGAAAAAG GAAAGTTTTG GTCACTGCAG CTACCTATTG CAACTGCAGA GATTGGATTT GCTCTGTTTT TGGTAGCAGT TGTCTCGATA ACAGCGGCTT TATACATTAG GTACAGATTG AGGAATTGTA GGTGCTCAGA AAATGATGCA AGGTCTTCTA AAGATTCAGC CTTTATGAAA GATAATGGCA AAATTCGTCC GGATCTCGAT GAGCTACAAA AGCGCAGAAG GGCTCGAGTT TTCACTTATG AGGAACTTGA AAAAGCCGCC GATGGATTCA AAGAAGAATC AATAGTGGGG AAAGGGAGTT TCTCATGTGT GTACAAAGGA GTACTGAGAG ATGGAACCAC TGTTGCAGTG AAGAAAGCGA TAATGTCATC AGACAAACAG AAGAATTCAA ATGAGTTTCG CACGGAGCTG GATCTGTTAT CAAGACTCAA CCATGCTCAT CTTCTTAGCC TTCTTGGATA CTGTGAAGAA GGTGGAGAAA GGCTTCTGGT TTATGAGTTT ATGGCACACG GCTCACTGCA CAACCATCTT CATGGAAAGA ACAAGGCCTT GAAAGAGCAA CTAGATTGGG TCAAACGAGT AACGATTGCT GTCCAAGCTG CTAGAGGAAT CGAATACTTG CACGGTTATG CTTGCCCTCC CGTGATTCAC CGGGATATTA AATCATCAAA CATTCTTATA GATGAAGAAC ACAATGCTCG AGTAGCTGAT TTTGGTCTCT CCTTACTTGG TCCTGTTGAT AGCGGCTCTC CTTTGGCAGA ACTACCAGCA GGAACTCTCG GTTACCTTGA TCCCGAGTAC TATCGACTGC ATTATCTCAC AACCAAATCC GATGTCTACA GCTTTGGAGT CCTGCTTCTA GAGATCCTAA GTGGAAGAAA AGCCATAGAC ATGCACTACG AAGAAGGGAA CATAGTAGAA TGGGCGGTTC CTTTGATCAA AGCTGGAGAT ATAAACGCAC TCTTGGACCC GGTCTTGAAA CATCCATCTG AAATCGAAGC TTTGAAAAGA ATCGTGAGTG TGGCTTGCAA ATGCGTGAGG ATGAGAGGGA AAGATAGACC ATCGATGGAT AAAGTGACAA CATCATTGGA ACGAGCGCTT GCACAGCTAA TGGGAAACCC AAGCAGTGAG CAGCCAATAT TACCAACAGA AGTAGTGCTC GGGAGCAGCA GAATGCACAA GAAGTCATGG AGGATCGGTT CAAAAGGGTC TGGTTCCGAG AATACGGAAT TTAGAGGCGG ATCATGGATA ACTTTCCCGA GCGTGACATC ATCGCAGAGG CGAAAGTCGT CGGCATCTGA AGGAGATGTA GCGGAGGAGG AGGATGGGAG GAAACAACAA GAAGCATTGA GGAGTCTTGA GGAAGAGATA GGGCCAGCTT CTCCTGGACA GAGCTTGTTC TTGCATCATA ATTTCTGAAA ACAAGTGTTG TTTTCTCAAG TCTTTAGTAA CCAATGACAT ATATAAGTAA GATATTTACT CTGATGTATA ATGTGTTCCT TAAGGCAGGA ATGTAACAAA GAGGCAGAGA GACTCTCTTC AAGGAAGAAT GTATCAAGTT TTTTTTCAAC TAATTATTAC TAAGTTCTTT TGTAGAAGTG AAC |
| Length | 3363 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18287477.. 18290866 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G59420.1 |
| Description | crinkly4 |
| TAIR curator summary | Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes. |
| Alias | [ACR4][CR4][crinkly4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8 |
Ahg485594 | IQ-domain 3 |
| 14.1067 |
Ahg495659 | FASCICLIN-like arabinogalactan 1 |
| 19.8997 |
Ahg484185 | IQ-domain 29 |
| 26.7955 |
Ahg359508 | |
| 28.3901 |
Ahg913250 | somatic embryogenesis receptor-like kinase 2 |
| 28.4605 |
Ahg485770 | GAMMA-TUBULIN COMPLEX PROTEIN 4 |
| 29.0172 |
Ahg485285 | IQ-domain 21 |
| 29.8496 |
Ahg487523 | Eukaryotic aspartyl protease family protein |
| 30.7409 |
Ahg473914 | PPPDE putative thiol peptidase family protein |
| 31.0805 |
Ahg494701 | Leucine-rich repeat protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|