Detail



ID : Ahg484185

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484185|fgenesh2_kg.5__177__AT2G02790.1
Sequence
GTGTAATTTC TTACTGTATC CACTTTTTGG TTTTTTAGGT CACTGCTCCG ACGAAAGAGC CTTCTAACAA GACAACATTT TGAAGAACGT AAGAGTAACG ATTCGGTACA TTGTTTCTAT TTTTGTAGCA ACTTTCTAAT TGTAGCCATT AGAAAAGATG GGAAAGACTC CAAGTCCTGG TAAATGGATC AAGTCTCTTC TTGGGAAGAA GTCATCCAAA TCGAGTTTGG AGAAAGGAGG CGAAAAATTG AGATCTGCAA AGAAAGAAGA GCTTGTGGTG AAGGTGAAGG ATAATAATGT CTCCAAGTTA CCTTCTGAAC CGCCTGCAAT TTCATCTCAA GAAGTTGCAG CTACTCAATC TGTAGTAGTT CCTGATGTTG TCATTACCGA GAAGCAGCCA AGCGGAGACA TTGAAGGCAA TGAGTCATCG AATGTGAATC TTGAGTCAGG GAATGACTCT GAAGAAGGAA AGCTTGAAGA AGCTGCTACA AAGGTTCAAG CTGCTCTCCG AGCTCATCAG GCCCGTGAAG AATTTCAGAA CCTCAAAGGT ATCATAAGGC TGCAAGCAGT TATCCGTGGT CACTTGGTTA GAAGACAAGC TGTTGCTACT TACTCGTGCA TTTGGGGAAT TGTGAAAGTA CAAGCACTTG TTCGCGGGAA GAAAGCTAGA TCTTCAGAAA CCGTGGCTCA ACTCCAGAAA ACAAATACGG AAACCGAGAC TTCTGAAGCT TTGCAAGGAA GCACTTACAG TTGGATGGAG AATCCTACAA AGCTCTCCAT GATTGATAAG CTTTTGGTTT CGTCACCAAC AACATTGCCT CTGAAGATCC AGTATAGTCC TGAGGATCCT AACTCAGCCA AGGTGTGGCT TGGACGCTGG ACGCAATTAC AGGTTTGGGC TCCTGGTCCT CTGGTGGTTA AGAATCTGGT ACCAAAATCT CAGACAAAGA AGCGAAGTTT TCAAACAGTT GAAACGGAAA AGGGAAAACT TAAGAAAGGT GTCAAGAAAC CATCCGGTGG TTCAAATACG GGGAACAGCT CGAGTAGCCG TTCAACAGCT GACAACGAAA AGCCTAAGCG AACTGTGAGG AAGGCCTCCA CACTTGGTAA AGAACTTTCA AGAATCGAGA ATGACAAGTC TAAGCAGAGT TCAAGGAAAA GTACTAGCGC CATAAAGGAA GGGTCTTCAG TGGATGTTAA AGATGAGAAG CCTAGAATTA GTCTAAAAAA GGCTTCACTT TCTAATGGGA TAGGGAAAGC TACCCGCAAA TCCGCTGAGA AGAAGAAAGA GATTGCAGAT TCAGTGCAGA AAGAATTGTC TATTGAAGAG GTTTCAGCTT CTGTAGCTGA TGCTCCTGAA GATGAAAAGA TGAATCTTAT CCCTGAAACA ATTTTGAAAG AGTCTGATCT CGATAAAGAT GAGAAATCAC CGGTCCTGGA TAACCCGGAG CAAGAGGAAC TCAAGACTGC CGAGAGAGAT GATAAAGCTG AAGAGGAACT CAAGACTGCC GAGAGAGATG AGAAAGCTGA AGAGGAAATC CAAGAGCCAG ACGTGCAGAT AAGCTCTGAG AATGGAAATG TTGCTTCTGA GAACACAAAG CCAAGCGATA GGCGAGCTTC ATTACCTGCA AAAATTGAGA ATCATCATCA AGACGATGGG CTTACACAGA GTGGGAGAAA AATCCCAAGC TACATGGCTC CAACTGCATC TGCAAAGGCA AGAATAAGAG GACAAGGGTC TCCGAGAATT GCTCAAGAGA AGCCTGAGAA AAACGGGACA ACACGGCGCC ACTCTCTTCC TCCTGCAGCC AATGGTAAGC TGAGTACAAT GTCTCCAAGG GCTCACAGAC TTCTCATAGC TTCAGCTAAA GGATCAATGA ACAGTGACAG ATCTTTTTCG TCTTCCAAGG ACATTGGTGG TAAGAGGTTT AAACCTATAA TTAATTATAC ACAAGCCTCT TCAATAACTT TTACACTATC TAGTATCTAC ATACTTTTAA CACATTTCGT TCATGTTTAT TTCAGACAAG TCGACGAAAG CTGA 
Length2044
Protein Sequence
Protein Residue
Map Locationscaffold_5: 963739.. 966809
Download Sequence
A.thaliana
AGI-codeAT2G02790.1
DescriptionIQ-domain 29
TAIR curator summary
Alias[IQD29][IQ-domain 29]
Gene coexpression
MR
MR Locus Description
10.4881 Ahg913314 RHO guanyl-nucleotide exchange factor 14
12.6491 Ahg482933 pseudouridine synthase family protein
12.6491 Ahg911231 IQ-domain 28
14.6629 Ahg928391 RING/U-box superfamily protein
19.8997 Ahg486409 crinkly4
21.4243 Ahg486510 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
21.5407 Ahg478922 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
22.8473 Ahg928063 cysteine synthase D1
24.96 Ahg496158 TARGET OF MONOPTEROS 6
25.04 Ahg490930 hydroxyproline-rich glycoprotein family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression