Detail



ID : Ahg486598

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486598|fgenesh2_kg.5__2590__AT3G61220.1
Sequence
AAAAAAAGAA ACGCCAATTA TTGATACTCT TTGCCTGAAA CCCAAAAGAA AAATAGGTTC GAAAATGGCA GAGGAAACTC CAAGATATGC TGTAGTTACT GGAGCAAACA GAGGGATTGG ATTTGAGATA TGCAGACAAT TAGCTAGTCA AGGGATTAGA GTTGTTTTGA CATCTAGAGA TGAGAAAAGA GGACTTGAAG CTGTTGAGAC ACTGAAGAAA GAGCTTCAGA TTTCTGATCA AAGCCTTGTT TTTCATCAGC TTGATGTCTC TGATCCTGCT AGTATCACAT CTCTTGCTGA GTTTGTGAAA ACCCTATTTG GGAAACTCGA TATCTTGGTC AATAATGCAG GGGTTGGTGG TATAATCACT GATGCTGATG CTCTAAGAGC TGGGGCAGGG AAAGAAGGTT TCAAGTGGGA TGAAATCATC ACGGAGACTT ATGAGTTAGC TGAAGAATGC ATCAAGATTA ACTATTATGG ACCAAAGAGA ATGTGTGAGG CGTTTATTCC TCTTTTGAAG TTATCTGATT CACCAAGAAT CGTCAATGTA TCATCCTCCA TGGGTCTACT AAAGAATGTA CTAAACGAAT GGGCAAAAGG AATCCTGAGC GATGCAGAGA ATCTCACGGA GGAAAGAATC GACCAAGTGA TCAACCAACT TCTCAATGAT TTCAAAGAAG GTACAGTTAA GGAAAAAAAC TGGGCTAAAT TTATGTCAGC TTACGTGGTT TCGAAGGCCA GTTTGAATGG TTACACGAGG ATCTTGGCGA AGATACATCC CGAGTTTCGC GTAAACGCGG TGTGTCCTGG ATTTGTTAAG ACGGATATGA ACTTCAAGAC TGGAGTTTTG TCTGTGGAAG AAGGAGCATC AAGTCCTGTG AGGTTGGCTT TGCTTCCGCA TCAAGAAACT CCTTCTGGTT GTTTCTTTAG CCGCAAGCAA GTTTCAGAAT TCTGAATTTT CT 
Length962
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19068871.. 19070303
Download Sequence
A.thaliana
AGI-codeAT3G61220.2
DescriptionNAD(P)-binding Rossmann-fold superfamily protein
TAIR curator summary
Alias[SDR1][short-chain dehydrogenase/reductase 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg923463 FTSH protease 1
5.2915 Ahg479910 Protein kinase superfamily protein
5.83095 Ahg925338 cytochrome P450, family 89, subfamily A, polypeptide 2
10.247 Ahg333019 UDP-glucosyl transferase 71B5
10.9545 Ahg939527 Aldolase-type TIM barrel family protein
11.3137 Ahg942756 NAD(P)-binding Rossmann-fold superfamily protein
11.8322 Ahg943195 fibrillin
14.0712 Ahg479430 presequence protease 1
14.0712 Ahg491144 catalase 2
14.1421 Ahg477119 Uncharacterized conserved protein (DUF2358)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression