Detail



ID : Ahg486615

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486615|fgenesh2_kg.5__2607__AT3G61415.1
Sequence
TTCTTTCTCT CTCTTATCCG CTCCTCTCTC TCTCTTTGGT CTGTTTCTGC CGCCGCCGTC GCCGTTATCC TCCGCCAGAT TCAAATCTTC CCGCCGCCGT CGACACTCAT TGCTTCTCCA TCCGGTCGTT AGGTATGTTA CGCTTCCAAG AAAAATATAA CTACTTTTTA TAGTGGGGAC TGTCCTATTT ATTGGAGCTT GACAGTGTAA TAAGATATTA TCTCAACGAG CGTTATACCC GAAGACTGGG TCTACAAATC AATGTCAGAA GGTGAAATGG CCATCATTAA ACCAGAGATG ATGAAATCAT ATATATGGCT TGAAACTGCT GATGGCTCAA TCCAACAAGT GGAACAAGAG GTTGCAATGT TCTGTCCCAT GATATGTCAA GAAGTAATAC AGAAGGGTGT TGGATCTTCT AAGAACTATG CAATATCTCT TCCACAGCGA GTCAATCCAG CCATGTTAAG TCTGATTTTT GATTACTGCA GATTTCATCA AGTACCTGGA CGTTCAAATA AGGAACGTAA AATTTATGAT GAAAAATTCA TTCGGATGGA TACAAAGAGG CTCTGTGAGT TGACCTCAGC CGCTGACAGT TTGCAGTTAA AGCCGTTGGT TGATCTTACT AGTCGTGCCC TTGCACGAAT TATTGAGGGG AAAACCCCTG AGGAGATACG CGAAATATTT CATTTGCCTG ATGACCTTAC TGAGGAGGAG AAATTAGAGC CTCTGAAGAA CACAATGGAT GATCCACGGA TTCGATTGTT GAATAGATTG TATGCAAAGA AAAGAAAGGA ATTGAAAGAA AGAGAGAAAC TAAAGAGTAT CGAGGTTGAA GAACATGTCG ATGAGCGGTC TGTGGATGAC CTATTATCAT TTATTAATGG CAGAGATCCC AAGGTAGTAA AGACTTCTAA GAGCAAAAAG AAGAACAAGA AAAGGAAGGA GCATAAAAAT GGTACTTCAA ATGGAACATG TGAAGCTTCG GAAAAGGATT CGCATAATCT TCATTCCAAA TCACAAAGTG CTGAGATTAT TGACAAGACT GCGTCCTGCT TGGGAGATGT ATCTAACTTA CTTAGTATGG AAGATGACAT TTTTACGCCA AAAACTGAGT TTGAAGATGG TTATATAGAT GATGAAATTG ATCCAGCTTT GAAGGAAATG CTTGATAGAG AGGTAGAGGA TTTTGCTCGG AGATTGAACT CTAGTTGGGT TCTATCGATA GGACAAGAAA GGCAGCCTGT GCACTTTTCC ATAAATGGCA ACGGGACTAC AAGGCGATTG ACAGGTCCAG CTGCAGGACA CAAGTGAAGC TGAAAACGCT AGCCCAATGG CTGGAACAGT TTTGGTGAGA TCCCCACTAG AATGTAAGCA ATTAGAGAGA GTGGTGTTCC GGTCACCGGC GTTTGATGTG TGTCCTCCTG TAATTTTTTT TTTCTTTCCA CAATCTGCTT TCTCTCTTTC TTCTCAGTTA ATTCGAGAGG TAGGATGCAG TTTTGTTTTG TTTTTTCTTA CTCCTTTTTA GTGATCAACC CTTTGTATAC AACTTTTAAT TAAAG 
Length1565
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19143909.. 19147606
Download Sequence
A.thaliana
AGI-codeAT3G61415.1
DescriptionSKP1-like 21
TAIR curator summary
Alias[ASK21][SK21][SKP1-like 21]
Gene coexpression
MR
MR Locus Description
9.27362 Ahg496943 Protein of unknown function, DUF547
9.27362 Ahg330259 COP1-interacting protein 4.1
12.3693 Ahg928006
21.6333 Ahg925527 ubiquitin 4
28.9137 Ahg474686 nuclear factor Y, subunit C2
36.9459 Ahg487865 RNA-binding (RRM/RBD/RNP motifs) family protein
43.795 Ahg927133 transcription coactivators
47.55 Ahg491599 Protein of unknown function (DUF1644)
49.3052 Ahg930784 RNA polymerase Rpb6
58.4808 Ahg472147
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression