Detail



ID : Ahg474686

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474686|fgenesh2_kg.1__4640__AT1G56170.2
Sequence
TTTCTTCTTC CATTTTCTGT TTCTATGGAA CCTTCTCTCT CGAATTTCTT TTTCTTCAAA TTTTGCTTCT TTGATCCTTT AGCTTTGACA AAACCAAAGT AACAAAAGTT ATCCTGTTTG GTCTCTGTTG TGAATCGTGC TCTGCTTTGT TTGTGACTCC AAAATCCGGA TTTGAAACCA GCATATCTGA GCTGAATTCG GGCATGGATA GCTTAGCAAT GGAGCCGTCA GAAGAGGGTC AACAGCAACA GGGAATGATG GATTATGTAC CTCCTCATGC TTATCAGAGT GGGCCAGTAA ATGCTGCGTC TCATATGGCA TTCCAACAAG CTCACCACTT CCACCACCAC CACCATCAGC AACAACAGCA GCAGCAGCTT CAGATGTTCT GGGCTAACCA AATGCAAGAG ATCGAGCATA CCACTGATTT CAAGAACCAC ACCCTTCCGC TGGCCCGCAT CAAGAAGATC ATGAAAGCTG ATGAAGATGT GAGGATGATC TCTGCGGAGG CTCCTGTCAT TTTTGCCAAG GCCTGTGAGA TGTTCATTTT GGAGCTCACG CTACGTGCTT GGATCCACAC CGAGGAGAAC AAGAGGAGGA CCTTGCAGAA GAACGACATC GCCGCTGCCA TTTCCAGGAC CGACGTGTTT GATTTCCTCG TGGACATAAT CCCGAGGGAC GAGGTGAAAG AAGAAGGTTT AGGGGTGACG AAAGGGACCA TACCATCCGC GGTGGGTTCT CCGCCATACT ATTACATGCA GCAACAGGGG ATGATGCAAC ACTGGCCCCA GGAGCAACAC CATGATGACT CTTAAAACTT TTCTCCTTTC GTTTGTTTGG TTGTATCGTA GTAAGGTAGC TCTGCTCTGC TGGGAACCAT TTCTATTGTG TTCTGTAATG ACATGTTAGT CACCAGATGA TCTACAGTCT ATATCTATGT CAATGTAGTT CCTGTTCTCA T 
Length961
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28291220.. 28292294
Download Sequence
A.thaliana
AGI-codeAT1G56170.1
Descriptionnuclear factor Y, subunit C2
TAIR curator summaryEncodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues
Alias[ATHAP5B][HAP5B][NF-YC2]["nuclear factor Y, subunit C2"]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg494266 BAX inhibitor 1
4.69042 Ahg474807 Tetratricopeptide repeat (TPR)-like superfamily protein
6 Ahg311691 glyoxalase 2-4
7.74597 Ahg486694 homeobox 12
9.79796 Ahg478250 Fes1A
10.3923 Ahg486839 Bax inhibitor-1 family protein
10.8628 Ahg322281 G-box binding factor 3
11.0905 Ahg487773 mitochondrial HSO70 2
14.8324 Ahg486731 Protein phosphatase 2C family protein
22.3607 Ahg922056 SGS domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression