Detail


ID : Ahg486626

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486626|fgenesh2_kg.5__2618__AT5G28350.1
Sequence
GAGATATAGC CAAAGATGTA TATGGCTTAC GGATGGCCGC AGGTGATCCC GCTTCTAGAA GGATCGTGTC CGTCTTCTCA GCGAGTCGTG TACCTTAAGC TCGCCGGCCG GCTATTGCTG GTTGTTTCTC CGTCTCACTT GGAGCTTTGG GGTTCTTCTC AGCAACGAGT GAGGTTGGGA AAGTATATGA GAGATGACAG GTCGGTGCGA GAAGAAGGAG AGAATTTGCA AGCTGTGTGG AGTCCAGACT CCAAATTGAT TGCTCTTCTT ACATCATCAT TCTTCCTTCA TATATATAAA ATTAAGTTTA CTGATAAACG AGTAAAACCC GGAGAGAGAC AACCCTCGGA GTTGTCTTTT GCGACCATAT CTCTTTTGCT AAGTGAGCAG GTCCCTTTTG CTGGGAAGGA CTTGTCTGTG AGCAATTTTG TGAGGGACAG CAAAACTATG CTTTTGGGAC TTTCTGATGG ATGTTTATAT AGTATTTCCT GGAAAGGAGA GTTTGGTGGA GCTTTCAGTA TTGGCTCCCA CCCTTCTGAT AGCAACGATG ATAGACTCTT GTCCTACACT CTTGGTAATG GGCTAGTCTC TGGAGTTGCT TCAGCAGCAC TTGCATCTGA TGATGAATTC TCAACAAAAT CGGCTATTGT TCAGCTGGAA CTCTGCACTC GCTCGAAGTT ATTGTTTGTG TTAAATTCTG ATGGGCAGCT AGTAGTATGC TCTGTGAATA AGAAAGGTTT AAAGTACACT GAGAGCATTA AAGCTGAGAA GAAGTTGGGT GGTGATGCTG TTTGTGCATC AGTGGCTTCA GAGCAACAAA TTCTTGCTGT GGGTACAAGA AAAGGGATGG TGGAATTATA TGATCTGTCA CAATCGATCT CTCTCTTACG AACGGTTTCT TTGCATGACT GGGGTTATTC AGCGGATTAC ACTGGGCCTG TCAATAACAT TGCATGGACG CCTGATAATT CTGCTTTTGC AGTTGGGTGG AAGTCGAGAG GACTTGCAGT TTGGTCTGTT TCTGGATGTC GATTGATGTC AACTGTCCGC CAAATTGGAT TGAGTTCTAC ATCTTCCCCT AAAATTAATC CAAAACAAGA CAGTAAATAC GAACCACTGA TGAATGGTAC TTCAGCCATC CAGTGGGATG AATATGGATA TAGACTATTT GCTACAGAGG AGGCATCAAG TGATAGAATT CTTGCATTTT CTTTTGGGAA ATGTTGCTTA AATAGAGGAG TTTCAGGAAA AACTTATGTT CGTCAGGTAA TGTATGGTGA TGATAGACTA CTGATGGTTC AGGCGGAGGA CACTGACGAG CTTAAGCTTT TACATCTAAA ACTTCCAGTT TCTTATATTA CCCAAAATTG GCCTGTTCAA CATGTGGCAG CTAGCGAGGA TGGGAAATAC TTGGCGGTTG CTGGTTTACA TGGCCTGATT TTGTATGACG TTAGGTTTAA GAAGTGGAGG GTATTTGGAG ATGTCAGTCA AGAACAACAG ATTCATTGCA AGGGTTTGTT ATGGTTGGGG AAGATAGTCG TAATCTGTAA CTACATCGAA GCTTCTGAGA CATATGAACT GCTTTTCTAT CCAAGATATC ACCTTGATCA GAGCTCTTTA CTTTGTCGTA AAGTGCTGCT TGGCAAACCA ATGGTGATGG ATGTGTACCA GGATTATATA CTTGTATCTT ATCTTCCGTT TGTCATCCAC GTCTACCATG TGAAGATATA TGGCGAATTG ACACCTTCAA GCAAAGCAGA TCTACAGCTT TCCACAGTAA GAGAGTTGTC CATCATGACT GCAAAGAGCC ATCCAGCAGC AATGCGATTT GTTCCTGACC AGCACCCGAG AGAAGGCGAG TTGGATAATG ATAATTTGTC TTCTGATTTG TCAGACAGGG AACCCTCAAG ATGTCTTATA CTGAGGGGAA ACGGGGAGCT TTCACTTCTT GATTTGGTTG ATGGACGAGA GAGGGAACTT ACAGACTCAG TTGAACTATT TTGGGTGACA TGTGGTCAAT CGGAGGAGAA GACAAATCTT GTCGAGGAAG TATCTTGGCT AGATTATGGA CACCGAGGAA TGCAGGTTTG GTATCCTTCT CTAGGGGATG ATCCTTTTAT GCAAGAGGAT TTCCTGCAGT TGGATCCAGA GTTGGAATTT GATCGTGAGG TGTATCCCTT GGGACTTTTA CCAAACGTGG GTGTCGTTGT CGGAGTTTCT CAAAGAATGT CATTTTCGGC AAGCGCAGAG TTTCCCTGTT TTGAGCCTAC ACCCCAGGCT CAGACTATAC TACATTGCCT GCTCCGCCAC CTCCTTCAGA GAGATAAAAA TGAAGAGGCG TTACTCTTAG CACAATTATC GGCAGAGAAA CCTCACTTCT CCCATTGTCT GGAGTGGCTT CTTTTCACTG TTTTTGATGC AGATATTTCT AGGCCAAATC CAAACAGGAA CCAGATTTCA GGACCTGGAT ATATTAAAAA GTTGTCCCTT TTGAAAAAAG CCTGTGATTT AATAAAAAAT TTCCCTGAGT ACTATGATGT GGTTGTGAAT GTAGCCAGAA AAACCGATGC CCGTCACTGG GCTGATTTAT TTTCTGCTGC TGGGATATCA ACAACGTTGT TTGAGGACTG CTTCCAGCGA AGATGGTATC GAACCGCAGC TTGCTATATA CTTGTGATTG CCAAACTAGA AGGTGTTGCT GTCAGTCAGT ACTGTGCATT ACGGCTATTG CAGGCGACAC TTGATGAGTC CCTCTATGAT CTTGCTGGAG AACTAGTGAG GTTCTTACTA AGATCTGGAA GAGACATCGA GCAGGCGCCA ACAGAATCAG ATTCATTGTC ACCTAAGCTT CTCGGGTTTC TTATTTTCGG TTCCAGCCAT AAGAAATCAT CACTTGATAA GAGCTCCTCA TTCAAAGAGC AAAGTCCTCA TGTTGCTTCT GTAAAGAGCA TACTTGAAAG TCATGCCAGT TACTTGATGT CTGGTAAAGA AATTTCAAAG CTTGTTGCAT TCGTCAAAGG CACCCAGTTT GATATCGTGG ATTTTCTTCA ACGAGAAAGA TATGGTTGTG CGCAGCTGCA GAATTTCGCT GCAGGACTTG AACTGATTGG GCAAAAGCTG CAAATGAGTG AGCTACAGAA CAGGTTAGAT GCAGAGTTTC TATTGGCTCA GATGTGTTCT GTCAAATTCA AAGAATGGAT AGTTGTTCTT GCCACTCTTT TACAACGGTC CGAGGTTCTT TATGATATTT TCCGGTATGA TCTACGGTTG TGGAAAGCAT ATAGCATGAC ATTAGAGTCT CACTTGGCTT TCGCTCAGTA CCATGACTTG CTTCAGATTT TAGAGGAAAA ACTCTCAGCG ACCTCACGAG AAGAAAGCAA TAGAGGTTCC ATCTCTTGAT AAATCACTAT ATTTTTGAAG CTTTTTCACA TTAAACATTT TCTGCCTGAG TTTTCGCATT CGTGTAGATA ACATTAATTT TCAGAAGAAA TAAGAAATAC ATCACCTCAC ATACTTTTAC TATTTATTTA GTTATTTTGG TCTCAATAGA AAGGAAAAGA AATGTAGAAG TC
Length3572
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19194648.. 19201210
Download Sequence
A.thaliana
AGI-codeAT5G28350.1
DescriptionQuinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg915270 Homeodomain-like superfamily protein
3.4641 Ahg317312
6.32456 Ahg950958 MEI2-like protein 1
6.63325 Ahg328832 Leucine-rich repeat transmembrane protein kinase family protein
10.198 Ahg920264 Tetratricopeptide repeat (TPR)-like superfamily protein
12 Ahg483241 Nucleoporin interacting component (Nup93/Nic96-like) family protein
12.083 Ahg480549 multimeric translocon complex in the outer envelope membrane 132
13.1149 Ahg471855 Per1-like family protein
18.4391 Ahg929659 Outer arm dynein light chain 1 protein
19.6214 Ahg488017 K+ efflux antiporter 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression