| Annotation |
|---|
| Description | jgi|Araly1|483241|fgenesh2_kg.4__2301__AT2G41620.1 |
| Sequence |
AAAAAGGTTT GAATCCCCCG AGAAACCCTC TCTTTGCTTC TTCTCCGGCT GACTGCGAAA ATCAATGGCG AACGACCAAG AGATGAGTGG TTGGACTGAT CTTCTCCATT CTTCGTCGAA GCTTCTTGAG CAAGCTGCTC CTTCTTCTCA GTTTCCTCCT CTTCAGAGAA ATTTAGATCA ATTGGAAGCG TTATCGAAGA AGCTCAAGGC TAAAACCCTA AGGAACGAAG CTCCTTCTCA GTCTATTGCT GCCACTAGAC TACTCGCACG GGAGGGAATC AATGCAGAGC AACTAGCTCG TGATCTTAAA TCTTTTGAGC TCAAGACAAC ATTTGAGGAT GTGTTCCCTG CTGAGGCGAC GAGCGTTGAA GAATACCTGC AACAGGTTCA TGAAATGGCT ATGGTATCAG CTATACAGGA AGCCCAAAAG GATAATGTTC GAAGCTTTAA TGACTACATG ATGAAAGTGC TGGAGGAGGA TTGGAGAAAA GAAAAACGTG ACTTCCTTCA GAGCCTCAGC AGAATATCAA TGCTACCTAA AACAAATATG ATTGATACAA GCAGAGAGGC TCATGCTGGT CAACTAGTGC CGGTGGCCTC GAGTCCTCGA GTATCCTCAA CACCAGGCAA AGAACTCGTG GCTCTGGCTA ACATACCCAT TCATGAGAAA AAAGCATATG TCTATGGAGA GGTTGTGAAG AAACTTAACT CTTCAAGAGA ACGAGGCTTG CCATTTAGAC CTGCTATGTG TTTTAAGGAA GCTTATGATA CTCTTGGTGC TGAGGTTACT CGTGGAAAAT CAGTCAACAT GCAGAAAATA TGGCAGCTTG TTCAGGCAAT AACAGGTGAA GATTCAGCAG TTCGACAGGG TGTTTCGAAG AGGATGGCCC TCGCGATAGG TGCAAGACAT CATTTACAAC ATGGGCATGA GAAATTTATA ATGGACACAA TTCAAAGTCA CCCTACCCAG GCTGCTCTTG GTGGATCTGT TGGAAATTTG CAAAGAATTC GTGCTTTCCT TCGGATTCGT TTGAGAGACT ATGGAGTTTT AGATTTTGAT TCAACTGATG CTCGTAGGCA GCCTCCTGTT GATACTACTT GGCAACAGAT ATATTTTTGC TTGCGAACTG GGTATTATGA GGAGGCTAGG GAAATCGCTC GGGCAACGCG GTCATCTCAG CAATTTGCAC CACTGCTTAC CGAGTGGATT ACCACAGATG GTATGGTGGC TGCAGAGTCT GCAGCTATTG CATCAGAAGA ATGTGAGAAA ATGCTAAGGA TGGGTGATCG GTTGGGTCGA ACCGCTTATG ACAAGAAAAA ACTCCTACTC TACACTATCA TTTCTGGTTC CCGTAGGCAA GTTGAGCGCA TACTGAGGGA TCTATCTACA CTCTTTAACA CAATTGAAGA TTTCTTATGG TTCAAATTGT CATGCATAAG AGACGTCACT GGTGTATCTT CATCTCTGGT CCTGAATGAT GGCCTTGCGC CTTACAGTTT GGATGATCTT CAGGCTTATC TCAATAAATT CGAGCCTTCA TACTACACGA AGAATGGAAA AGACCCCTTA GTATATCCAT ATGTTTTGCT TCTCAGCATT CAGTTGCTAC CGGCTATCAT GCACTTATCT AAAGAAGCAG GAGACGGAGG GTATAATATT GATGCTATTC ACATAGCTAT TTCTTTGGTG GACCATTCCG TTTTATCTGA AGGCTCTGGG ACTGGCCACA AACTAAGTGT GATGGATTCT AACGCTGAGG CATCTAGCAT GATTAGGCAA TATGGGTCAA TGTTCCTGCA TCACGGAGAT CTCCAAATGA CGGTAGAGTA TTATGCACAA GCTGCTGCTG CTGTAGGTGG GGGACAATTA GCTTGGTCTG GAAGAAGTAA TGTGGATCAA CAGAGGCAGA GAAACTTAAT GCTGAAGCAG CTACTAACTG AGATTCTGCT TCGAGAAAGA GGTATTTACT TTTTGCTTGG AGCAAGAGGT TCTGGTGAAG AAGGTCAGCT TGGAAGATTT TTCCCTGATT CTAGATTGAG ACAACAGTTC TTGGTCGAAG CTGCACATCA ATGTCAAGAA GCTGGATTAT ATGACAAATC CATAGAGATA CAGAAGAGGG TGGGTGCATT TGCGGCTGCC TTGGAGACTA TAAACAAGTG TCTATCTGAA GCCATCTGTT CTCTTGCCCG TGGAAGGTTG GATGGTGAAA GCAGAACATC AGGGCTTATT CTCGCAGGGA ACGATATTCT TGAGACTTAC AAATATTACC CTGAAGTCAG TCTCCAGGAA AGAGAGCGAG TGATGGAACA AGAAACCATA CTAAGAGAGC TTGAGGCAAT ACTATCGATC CACAAGTTGG GTAGATTAGG CAATCATCTG GATGCTTTAA GGGAAATTGC AAAACTTCCA TTCCTTCATC TTGATCCAAG AGTGCCCGAT GCAACCGCTG ATGTGTTCCA GAGCGCATCT CCTTACTTCC AGGCTTGTGT CCCGGACCTG CTCAAAGTTG CTCTAACGTG TCTGGACAAT GTACCTGACA CTGATGGGTC GATCCGTGCC ATGAGATCCA AGATTGCTGG GTTTCTTGCA AGCAACACGC ACCGGAACTG GCCTCGTGAC TTGTACGAGA AGGTGGCTCG AAGCTTTTGA ATATTTTTGT GATTCTGTTG ACTTTTTGAC GAGGATCCGA AGCTCGTATA AAATGAAATA CATTAATCTA GGTGAAACAT GTAATATTGC AGAGAGATTG TTTTTATAGA ATTTGTTGTT TTTGTGTGAG TTATGATATA GTGGATTTTG ATAAGAAATT GTTGTTTATT TTCTTATATC TAAAATTATA TAATATCAAT TCAAATTAAT TATTTTTTGT CATTTTTATT GAAAGTTACT GATGCAGAAT CGAATTTAAA GAGATCTGAA GAAAATGATA AATTTTTGCA TGGCATGAAA AGAGTTTCTC TCATGAAGAT CTCAAAATTG ATATGGGGCG TGAGATGAAG AAGAATTGTG TAATTACATA AACACAGATC AACAGAAGAA GAGAACCATA CACAAAAACC CTAAACAAGA TGGGCTCTTT AGCAGGAGAC ATAACCGCCA AGTACACACA ATCTCGTATA AGAACAAGCA ATGCCAATCC TTCCACTGCA TTTTTAATCA CCAAAACTCT CTTCTTCTTT CCTTCTTCTT TGCATAACTT GCTTATAATC CTCAAAATCA AAACACCAAC CACCAAGAAC GTTGTACTAG ACCATCCTCG GTACGTGACA ATCTTCCCTC CCACTATTAA TGGCTCTTTC CTGCATATAC AAGACTTGCA GACTCCAGAG AAAGTTGACG TGACCAGAGC ATCAAATCCT GTATAGTAGG GGAGAATCAC AGCGTCTAAG TAAAGACTAG CGTGGAGGAT TCCCGAGATA GTAGAGGCTT CGAAGAAGAC AAAGCTCGCT TCTTTTTCAA TATTGTTCTC GAACATAAGC ACCGAGAGTT GAACAAGCTG TACTATAGCA GGTCCAAAGA TGGAAATTGG GAAAAGGGTG TTGATCCTTT GACCTTTTGC AAGGATCAAG ATGATCAAAG GAAGAGAGAT TGGACCAGAA GGAAGTAAGT ACCTCTTTGC TTTATCATCA TCATCATCAT CATCATTAGC ATCTTCTCTT CTTCTTCTTG ATATAATTAC CTTCCTTAAG ACAACAATTA GCGTCGTCAA GTAAAGAACC GTGATGAAGA AGAAAACCAG AACATCAGTG ATTTGAGGGT AGTCGCCGGC |
| Length | 3770 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19237839.. 19251110 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G41620.1 |
| Description | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg347147 | zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein |
| 3.4641 |
Ahg488148 | ARF GTPase-activating protein |
| 4 |
Ahg495232 | cleavage and polyadenylation specificity factor 160 |
| 4.3589 |
Ahg479356 | histone deacetylase 15 |
| 5 |
Ahg491627 | DDB1-CUL4 associated factor 1 |
| 5.83095 |
Ahg924045 | calpain-type cysteine protease family |
| 7.07107 |
Ahg482512 | basic region/leucine zipper transcription factor 16 |
| 7.14143 |
Ahg937735 | SER/ARG-rich protein 34A |
| 7.34847 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 9.53939 |
Ahg476131 | DEAD/DEAH box helicase, putative |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|