Detail



ID : Ahg486660

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486660|fgenesh2_kg.5__2652__AT3G61710.1
Sequence
TCGAGAAATC TAAAATTAGG CGGTGAATGA TTTAGATTAG TAAGAAGCAT CACACACACA GATTGATAAG TGTAGATAAA TTCAAACCCA AACCCTAGAT TGATTGCGTA CGGAGAGCGA TGAGGAAAGA GGAGATTCCA GATAAAAGTC GGATTGATCC GAATCTGCCG AAATGGGTCT GCCAAAACTG TCACCACGCC CTTACCATCG TCGGCGTCGA TTCCTACGCC GGCAAGTTCT TCAACGATTC CCCTCCTTCC GGTACGCAGG GCTCCTCCAT CCATGGAGCT AGCAGTGTTC TTGGTTCAAC ACGCATGGAC AACTCTTTCG TTGTTTTACC TCGACATAAG CCTCATCAGG GCATTCCTCC ACGTCCTCGT GGGGCCTCGT CTGCTCAGCC TGATGCAACT CATTCTGGAA AGGCAATGGA AGAATCGTTT GTAGTTGTGT ACAAGTCTGA GCCTGCTTCT GATTCTGGCG CTTCTCACAA TCTGTCTCTT GAAGTGGGCC AAAACGGTCC CTTACATTCA AATACTTCTG GCTTTAATGC GACTATCAAT GTCTTAACAC GTGCTTTCGA TATTGCCAGA ACTCAGACAC AGGTTGAACA GCCATTGTGC TTAGAATGCA TGAGGGTATT GTCTGACAAA CTTGAAAAAG AAGTCGAGGA TGTGACGAGG GACGTGGAAG CATACGAAGC ATGCGTTCAG CGGTTAGAAG GGGAGACACA AGATGTTCTT AGTGAAGCTG ATTTTTTGAA GGAAAAAAAG AAGATTGAGG AAGAAGAAAG AAAACTTGTT GCAGCTATAG AAGAAACAGA GAAACAAAAT GCTGAAGTAA ACCATCAACT GAAAGAGCTA GAGTCAAAGG GAAATCGCTT TAACGAACTT GAAGATCGGT ATTGGCAAGA GTTCAATAAT TTTCAATTTC AACTAATAGC ACATCAGGAA GAGAGAGATG CAATCTTGGC AAAGATTGAA GTTTCACAAG CACATTTAGA GTTATTAAAT AAGACTAATG TACTTACTGA TGCCTTCCCC ATACGGTATG ATGGAGATTT TGGTACAATT AACAATTTTC GACTTGGAAG ACTCCCTGCC ATAAAGGTTG AGTGGGATGA GATCAATGCT GCTTGGGGCC AAGCCTGTCT TCTCCTCCAT ACGATGTGTA ACTATTTCCG GCCAAAGTTT CAATGTCGAG TTAAAATACA GCCGATGGGG AGTTATCCTA GAATTGTAGA CAGCAACAAC GAAACTTATG AGCTGTTTGG TCCTGTAAAC TTGTTTTGGA GTACTCGGTA CGATAAAGCC ATGACACTGT ATTTGATGTG TCTTAAAGAC TTTGCTGATT TCGCAAATTC AAAGGACCAA GAGAACAATA TTCCACCAGA GAAATGCCTC AAACTTCCAT ACAAGATCGA AAAGGACAAA GTGGAGGGAT TTTCAATAAC ACAGAGCTTC AACAAGCAAG AGAGTTGGAC CAAAGCACTA AAGTATACTC TCTGCAACCT CAAATGGGCA CTCTACTGGT TCGTTGGAAA CACTAATTTC CAACCTCTCT CTGCGACGGT CTCTCTGCCT TCTGATATAT CAGCTGCTGG TTCCTTGTAC GCCAAGCGAG GTCCTGATTC TAGTAAGCCC TCAGCTGGTA AAAAACCTTA GAAACTCATG ATAGATTGAC TGAAATCAGC GACTTTGTGA ATAGTTTATA AGCATTTATG CCATAGCATC GAATAATAAG AAACACAGAT GCTTTTAAGT TTTTTTTTTG TGTGATTATA GCCCTTTTTA TTTCGTTAGT 
Length1800
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19331924.. 19335025
Download Sequence
A.thaliana
AGI-codeAT3G61710.1
DescriptionAUTOPHAGY 6
TAIR curator summaryEncodes autophagy protein 6 (ATG6), required for pollen germination and plant development.
Alias[ATATG6][AtBECLIN1][ATG6][BECLIN1][AUTOPHAGY 6][BECLIN1]
Gene coexpression
MR
MR Locus Description
12.2882 Ahg896860 glycine-rich protein
13.6382 Ahg473598 Protein of unknown function (DUF803)
24.3311 Ahg488536 SART-1 family
24.8193 Ahg890636
31.607 Ahg484997 nudix hydrolase homolog 9
34.176 Ahg472236
34.5832 Ahg489499 D111/G-patch domain-containing protein
42.2847 Ahg916256 KRR1 family protein
45.3652 Ahg937352
45.9891 Ahg481908 alternative NAD(P)H dehydrogenase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression