Detail


ID : Ahg486715

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486715|fgenesh2_kg.5__2707__AT3G62080.2
Sequence
TCTCTCCGAC GATCTCCGTA TAAAACTTAG TGCGGCGGGA AATCGACTTT CAAATTCGCA GGATTCTGTC GAAATTCTTG AAATGGATTC GGAAGCTGTG AAGGAGTTTA TACGAAGGGA AGTTCCAGAT TGGGACGATG AGGTGGTGAC GACGGCTAGA TTCAAGGCGT TTAGTGGGCA GAGATCCGAT TGGGAACTTA AATTTCAGTT TTGGCGTGAT TTGATCCTCA AGGTTTCGCG TCAGTTTGGG TTGTTCATCA TTGATCCTGT TAAGGTGAAG AAGGCGTGGT TTAATCGAGG AGGAATAACG CCTTTATGCA TTGATCATGT TCTGTTATTG ATGCATAGTG AAGGTGATGT TGTGCGGATT AGCGATATTG ATGATCCGGG TAGTGGTCGT ATTTCTCGTT TATTGAGGAC AGTGAGGAAC TTGATGGTTC GACAGTCAGT GAAGCCGGAA GAGATTCTGG AAACTAAACT TGTTTTTGTC CCACTCTTGA AGGAGAAGGC TGCTGACGTG GTGAATATAT TATCTGAGGG ACACTGGACT TCTACTTGTG TTGTCACGCT GAAGAAGTTT CGGAATTTGT GCAACGGCTC GAATGAGGCA TCTGCTGTTT TGAGTCACTT GTCAGGTTGT GGAAAAGCGC ATAAAATCTC TATCAATCGG GGAGAACTGA TCGAGGGCGT TAAAGTGTCC TTTTCACAAG CAGCACTTCC CAGTATCTCA ACTTTAGACT GTGATATTCT GCACTTGCTA AGGACTACAG AAAAGCTCCA AGATCAACTT GAAGTGATGG ACCAACGTTG TGAAAAGTCA AAGAAATCAG CGCTGGCATC TCTAAAGTCT GGACACAGGA AAGTTGCTCT AAGGCATGCA AGGGAATTGA AGTTGGCGAC TGAGAGCAGA GAAAAATGCA CGTCACTTCT GAACAGAGTA GAAGAAGTGT TGAACACTAT AGCGGATTCC GAATCTACGA AAATGGTCTC AGAAGCAATC AAAACTGGAG CTAGGGTTAT GAAGGACGTC AAGATCAGTG CAGATGATGT TCATGACTAT TTAGAAGAAC TTGAGGAAAC TATTGAATCA CAGAAGCAAG TCGAAAAAGC TCTCGAATCA GCTCCATATC CAGATACTGA TGATGAAAAT ATCGAAGAAG AATTACTGGA ATTAGAGATG GACCTTGAAA GTGAAAGTTC TCAGGTCCTA CCAGCGACTT CAGATACTGC AGATTCACTG ACTGAGATGT TCTCAGAGCT TAAACTTGGC AAGACGAAAC AAACATTGGA AGAGCAAGCT ACTGAGCCAG CTCGGATGAA AGATAGCGGA AAAAAGATTC TTGAAGCAGC ATAGCTGAAC AATGCATCTT CATTGTGGTG CGATCTCTTC TCTTACTGTT GTACTTAGAG AAGAAATACA CTCAGTATCA TATAAATAGA ATAGAAACGG GTAAAGTGAG TTGAGTATTT GTATGCTATG CCTCTTGTTC GGATTCAAGA AACAATAGCT TCACTCCATT GTATAAAGTC AGGAGCTTGT TTCATAAACA GAGAGGAAGG TCGAATGATG ATTTTGATCA CTCCGATAGT GGTTGATAAT TTATTAATGT TTCT
Length1614
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19519625.. 19522152
Download Sequence
A.thaliana
AGI-codeAT3G62080.2
DescriptionSNF7 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.6214 Virus2595
19.6214 Virus1109
23.9165 Ahg351537
27.9285 Ahg919325 conserved peptide upstream open reading frame 8
37.027 Ahg929120 F-box and associated interaction domains-containing protein
48.5901 Ahg899149 RING/U-box superfamily protein
60.0999 Ahg336233 F-box family protein
69.0941 Virus1400
93.0484 Ahg932962 Flavodoxin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression