Detail



ID : Ahg929120

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929120|scaffold_301577.1
Sequence
ATTTGCTTAA GCTTGAGAGA ATGACGACAA TAGCCGATCT TCCAGGCGAT TTGGTAGAGG AGATACTCTC TAGAGTTCCA CTGACATCTT TGAGAGCAAC ACGATCTACT TGCAAAAAGT GGAACGCTTT ATCGAAAAAT CAGATTTTTG GTAGAAAAGC AACAGCAGCA AGGAAGCAGT TTATGGGGTT TATGATGAAG GATTCAAGGC TTTGTTCAAT TGAATTCGAT CTCCAAGGAA TCCGAAATGA AGACGGCAAC TTCGTTGATC CATCTATAAA GCAAGTAAGT ATACTTAACC AAGTCGAGGT ATCTAATGTC TTTCACTGCG ACGGTTTATT GCTATGCGTC CTTGAGGACA ATTCGAGGCT CTTGGTATGG AATCCGTATT TGGGGCAAAC CAGGTGGATC CAACCCAGAA ACACTTTCAT GAGGCATGAC AGGTATGACA AGAACCGTAA CCACAAAATC TTGAGGATTT TCTATGTGAT CGACCGCGTT TCTGGTTTCG AAATCTACGA TTTTAGCTCT AATTCATGGA AGGTTCTTCA TGTCACTCCT GACTGGGAAA TAATGCCTCC TCGGCGTGGT GTGTCTTTGA AGGGAAATAC TTACTTTCCT GCTCAAAAGA GAACAATAGT GGGTGTAGGA ACAAGAAGGA TAATAAAGAG TGAAGATTTT TTAGTCTGCT TTGATTTTAC AAGAGAGAGA TTTGGACCGC TTCTCCCTCT GCCGTTTCAC TCTTACAATG TTAGACTTTT TGTGTCTCTA TCTTGTGTTA GAGACGAGCA GCTCGCTGTG TTATATCAAC GCTTGGACAC ATATGATGGG ACAGTCGAGT TTTGTGTTAC AGATAAGATT GATCCCAATG CTGTGTCTTG GAGCATGTTT TTGAAACAAG TCATTGGTTT TACGGTTAAA CCTTGTGCTG GGAGTTTTTT CATCGACCAA GAGAAGAAAG TCGCCGTGGT TTTCGATATA GATGTATATA AAAAGGTCAA GGAATGTCGC TATCAAACAG CTTACATCAT TGGACAAGAT GGATACTTCA AATCTGTGAA TATCGGACAA GCTCGGGATC TCGGGAGAAC AACTGGCGTT CCTTCATCTG TTGTCAAGGG ATTTTGTTTC CCACTTGTGT CCTCTTCTTA TGTTCCAAGC TTAGTGCAAT TGCAAATCAA CCAACCTCAG GGCATAAGGA ACGAAAGCTA TGATTAATTT ACTTTCCATT TTACAAT 
Length1237
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5295554.. 5296631
Download Sequence
A.thaliana
AGI-codeAT3G13680.1
DescriptionF-box and associated interaction domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
34.1906 Ahg474412 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
37.027 Ahg486715 SNF7 family protein
37.55 Ahg926235 eukaryotic elongation factor 5A-3
52.7257 Ahg934838 Integrase-type DNA-binding superfamily protein
61.1964 Ahg483028 ARM repeat superfamily protein
62.2575 Ahg934611 Transducin/WD40 repeat-like superfamily protein
64.9923 Ahg327414 methionine sulfoxide reductase B3
71.3302 Ahg901939
73.2666 Ahg927120 Protein of unknown function (DUF300)
74.1755 Ahg476096 Protein of unknown function (DUF1666)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression