Detail



ID : Ahg486989

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486989|fgenesh2_kg.6__123__AT5G02130.1
Sequence
TCTGAACAAG ACAAGAAAAA AGAGTAAATT GAGCGATTAT GATTCGCGCG GCTACCAAAG TTTCAAGAGC AGCAGCGGCA ACGATTCGTG GCCGCACGAT CTCCGTTAGA GGAAACCTTA TTAGATACTC GACGCCACTG AGATTGATTC ACGGTGAAAT CAGTGTTCCA AACGCGAATC ATGTTGCTAT TCAGATGGTT AATTACGCTC TTTCTCACGC TAGGTCACAA AAATCAGATG AATCTTATGC TCAAGGGATG CTAGTGCTTG AACAGTGTCT TGAGAATCAA CCTAACGATG ATCAGGTTTC TCATGATTCT AAAGCAACAG TCTTGCTTGC CATGTCTGAT CTTTTATACG AAAGTGGGAA CAGTAGTGAA GCCATTGAAC GCCTTAAGCA AGTCATGACT CTGACACTCT CATCGTTGGC TATAAGAGTT GTTGCTGTGG AAGCTCTTGT TGGTCTGCTG ATTCAGTCAG GACAGGATGA TGCTTCATTG GATGTTGCTG GCGAATTCCT GGAATTGGTA AAAGAGAGCG GCCATGAGAA TCTTCAGGAT GTGGTTGCTA CAGCTAAAGC AATCAAAGGC CTAGCTGAGC TTGTGAAAGG AAATATTGAA TCTGCCGAAT CTTTATTTCG AGGACTTGAG AATCATGAAA GCTGCAAAGG TAACATTGCA CTTTCTTATG GTGAATTCTT GCACGCCACT GGAAATTTTG AACTGGCAAA GGAGATGTAT CATAAGGCAA TTCAAGGAGT GACAGAGACC AAAGAATCTA TGTGTTCATG TAACATGAAT TTGAAGGCAG TCTCGCTGGC AGCCACATTT GCTCTGGGTC AGCTCGAGTC ACACATTGGA AACTTTGGTG TTGCGGAGAA GACACTGACA GACGCATTGA CAAACGCTGA GGAACATTAT GGAAACAATC ATCCTAAGGT TGGTGTGATC TTAACCGCTG TGGCTCTGAT GTATGGAAAC AAAGCAAAGC AAGAACGCTC AAGTTCTATC CTGATTCAGG AGGGCCTCTT CAGAAAAGCA TTGGAGCTCA TGAAAGCACC TCCACTGGAT TCAGAAGGGA TAATAAACAT GGAAAATCAA GGAGTAATGG CTTTAGCAAG AGCCGGGTAT GCGGAGTTAC TACTGATTCA AGAGAACAGA AAAAGCGAAG GAGAGAAAAT GAAATCATGG GCCGAATCTG CGTGGAGAAA CAAACGCATC TCTCTTTCAG AAGCATTGAC TCTCTCAGAG CCATTAGGTA AAGTAGCAAT CATAGATGCT CGCACCACTC GAGTCCTCTA AAAGAATCTT TTGATATGTA ATTAAACTTC AGAATTTTAC ATTTCATAAG A 
Length1351
Protein Sequence
Protein Residue
Map Locationscaffold_6: 491839.. 494180
Download Sequence
A.thaliana
AGI-codeAT5G02130.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summarymutant has Growth rate reduction, increased salt sensitivity; Putative Kinesin Light Chain
Alias[NDP1]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg951033 ubiquitin-conjugating enzyme 3
25.2982 Ahg322854 glucose-6-phosphate dehydrogenase 5
25.5343 Ahg493386 Mitochondrial substrate carrier family protein
26.7208 Ahg487451
27.7308 Ahg490342 sucrose synthase 3
32.7261 Ahg475327 protein phosphatase 2A-2
37.9473 Ahg477303 P-loop containing nucleoside triphosphate hydrolases superfamily protein
38.3667 Ahg491332 metallo-beta-lactamase family protein
42.638 Ahg486415
46 Ahg924211 Esterase/lipase/thioesterase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression