Detail



ID : Ahg487451

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487451|fgenesh2_kg.6__585__AT5G06440.3
Sequence
GACTTTCTGT GCTAATCCCT CTTTTTTCTC TTTTCTCTGT AAATTGTGAT CAGATCATTA AATTTTCTTC TGGGGGTTTT TGATTCTTAT CACTGATTTT GTGGATTGGT CTTTTGTTTT TAAAGGTGAG AGCTTGAGAT ATGCAGAAGA AACGAGAGAT CTGTGAGTAT AGAGAAAAAT TAGACAAGAC CTTGTCTTCT CCTGAACTCA CTAATCACGA GACTCTCAAA TCTCTTCTCA GAAACCAGCT TCAAGAGTGT GATGAGAATA TATTGGATAA AAGAACAGAT GATGTATCCA AGTTACTTAG CAAGCTTAGG AGTGTTTCAA TGACGGATCA TCAAGTTTCT AAATTAACCA ACGATGGTGA TTGGAAATTG AAACATGATC TTGAAGATTG CCGTGTTATG TACCGTGAAG GGCTCGATGG AAGTCCTTTT CACACGTTGC TCGTTGAAGG TTACATGGAT GGGCCTATCC ACGAATGTTT ATGCGTATCG TGGGAATCAA CTCTCTACAA GAAATGGTGG CCACAGTATG CATTTCCTCC ATTCAGGATC TTAAAAAGCA CATGCTTGCA AAAGGTCGGG GTCGGTGAAC AAATTTGTTT AGCGAGGATG AAGGTACCAT GGCCATTGAC GGAAAGAGAG ATGATTCTGC ACTATTTCTT TTTTGAATAC TTTAAAGATG GCTTAATCGT CATCCTTCTG AACACGATCT CTGATTTAGA TAGCATTGGA GTTTCCTCTA AGGACATCGT CATACCTGAA TCACCGGATG CAGTGAGGAT GGATCTTGTA GGCGGATTTG TTTTACAAAA GGTTACTCCA CAGAGGAGTT ACTTCAGAAC GATAGGGGAT ATGGATATAA AGCTGGACTT GATACCACCA TCTCTTATGA ATTTTATATC GAGGCAGCTG ATCGGCAACG GTTTCAGACT ATATAAAAAG TCAGTTGCTT CCGTAGCTAA ATTTGATGAA GATTACAGTA GAGCTTTGAC TGATCCGTTG TACACTAAGA TACGTCAAGC CCTATATTCA ACTGATGAGG CAATTGAGGA AGAACCAAAG TTGGAAACCA ATGAAGTGAA TGGCGATTAC CTGCCAAAGC ACGAACACGA GAATAATGGA GATACTAGTG TAAATAAACT TGTCCATTGT AGAAGAACTG TTCCCGAGAT TGAAGAAGAA GAAGTTGAAG ATTCTGAGGA AAGCGTTTTC TCAGAGGATG GAAATGAAAT TGCCAAGACT CATGTGGATA TCAGAAGACG GTTTTGCGTC AGTCCAGAGG TAGAACAAGC TTTAGGGACT CTAGATAGAG TAATATACAT GGTTAGAAAT ATAACGCCAG TCCCAGAAAC CAAGGAATTG TCGCCAAATA GAGCAGAGGA TCAGGCAAAG CAAGTGAGTG TATTGGAGAA CATTGAAAGT GTTCCTCAAA AAAAAGAGTC AAGCGATTTT AGTCAAGAAG AGAAGAGAGA AGAGGATACA GGACAAAAGC AGGGCATGTT AAACAAAGGT AAGAACTTGA GCTTGCAGAG GAATCGTAAA GCCGGCTGCT TTGCTTTCAG GTCTTGGCTC TGAAGGAATT GGAATTGTAA TTTTTTTTTT CACTTAAGTT TCTTCTTCTC AGTTGCATGA TCCATGTAAA AGTTTGTTGA TTATTTTTGT AAA 
Length1673
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2328876.. 2331296
Download Sequence
A.thaliana
AGI-codeAT5G06440.4
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.7703 Ahg898127
11.9164 Ahg928205 germin-like protein 8
15.0665 Ahg925855 Protein with RING/U-box and TRAF-like domains
16.9115 Ahg333551 dicer-like 1
20.9284 Ahg490342 sucrose synthase 3
21.4942 Ahg906345
26.7208 Ahg486989 Tetratricopeptide repeat (TPR)-like superfamily protein
29.4618 Ahg927795 Peptidyl-tRNA hydrolase II (PTH2) family protein
30 Ahg945006 pathogenesis related homeodomain protein A
31.7805 Ahg912544 Protein of unknown function (DUF1664)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression