Detail



ID : Ahg487077

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487077|fgenesh2_kg.6__211__AT5G03040.1
Sequence
CTCTCTCTCT CTTCTTCATT CGCAATTATG ATAATGTGAA AGCATAAGAA AGAAGAAGAA GAAGAAAAGT TATCTTCGCA CCTCAGCAAA GATCCAAACT CTCATCGATT CGATTCTTGG CTTTTTCGTC TTCTCCGATA AGGTCACTAC TTACAAGCCG CGTTGAGGTT TAGTTGACTC CTCCAGGTTT TATATCTTCA AGGGTTTCGT CTATCAGATC TGGTGTCACT GTCTTCTCAC AGGATTACAT AGAGATGGGG AAAAAAGCTA AATGGTTTTC AAGTGTTAAG AAAGCATTCA GCCCAGATTC AAAGAAGTCG AAACAAAAAT TGGCTGAGGG ACAAAATGGT GTGATCTCTA ATCCTCCTGT GGTTGATAAT GTTAGACAAT CTTCTTCTTC TCCTCCTCCT CCTGCTCTTC CTCCTCGTGA GGTTAGAGTA GCTGAAGTGA TTGTTGAACG GAACAGGGAT CTTTCCCCTC CTTCGACTGC AGATGCTGTG AATGTTACAG CTGCTGATAT TCCTGTAGTT CCATCTTCAT CTGCTCCTGG TGTTGTTCGT CGCGCTACAC CTGCTCGATT TGCGGGAAAG TCGAATGAAG AAGCCGCTGC TATCTTGATT CAAACTATTT TTAGAGGCTA TTTGGCAAGA AGAGCACTGC GGGCAATGAG GGGTTTGGTC AGGCTTAAGT TATTGATGGA AGGCTCTGTT GTTAAACGGC AAGCTGCAAA TACTTTAAAA TGTATGCAGA CTCTCTCTCG TGTACAGTCA CAGATCCGAG CTAGGAGAAT CAGGATGTCA GAAGAGAATC AGGCTCGCCA GAAACAACTC CTTCAGAAGC ATGCCAAAGA GCTAACTGGC TTGAAGAACG GGGATAACTG GAATGATAGC ATTCAATCAA AGGAGAAAGT TGAAGCGAAT TTGCTAAGCA AGTACGAGGC AACAATGAGA AGGGAAAGGG CATTGGCTTA TGCATACTCT CATCAGCAAA ACTGGAAGAA CAACTCTAAA TCTGGTAACC CGATGTTCAT GGATCCAAGC AACCCGACAT GGGGTTGGAG CTGGTTAGAG AGATGGATGG CTGGTCGGCC ACTAGAGAGT TCCGAGAAAG AACAAAACAG CAACAGCAAC AACGACAATG CTGCCTCGGC CAAGGGCTCT ATTAACCGTA ACGAAGCTGC AAAATCTATA ACCCGCAATG GCTCAACTCA GCCAAACACA CCATCATCCG CAAGAGGGAC CCCAAGAAAC AAAAACAGTT TCTTCTCACC TCCAACTCCC TCAAGGTTAA TCCAATCCTC GAGAAAATCC AACGACGACG ACGCCAAAAG CACAATCTCG GTCCTGTCAG AGAGGAACCG CAGACACAGC ATTGCTGGTT CATCAGTCAG AGACGACGAG AGCCTCGCTG GCTCACCGGC TCTCCCGAGC TACATGGTTC CAACTAAATC AGCTAGAGCC AGGCTCAAGC CGCAAAGCCC ATCAGGTGGT ACCACACAGG AAAACGAAGG GTTCACGGAC AAGGCATCTG CTAAGAAACG GCTCTCGTAT CCAACTTCAC CTGCATTGCC TAAACCACGG CGGTTCTCAG CTCCTCCTAA GGTGGAGAGT GGCGGTGTCG CTGTGACCAA CGAAGCAGGT AGCTGAGGTA TTTATTTAAT ATATTTTCTT TTCCCACTTA TGGATGTGTC CGAGAGATTG TCGTCTGTTA TGTGTTCCCT TCATTTCGTA ATTCATTTGT GCAGTGTAAG CGCCAGTCAT TTATTTTTTT ACGATAATAA ATTTTATAAC CTTTTTAAAT TCATATGTTC CTTTGTTTCT TTGAATACTT AAGTGGTTTT ATTAAAAATG TTGAATGAGT TGGAATCTGA GGCTGTTATT TGAATTGTAA TGCAAGATCC TTAAAAGCTT AATTAATTCT TTATACCTTT T 
Length1931
Protein Sequence
Protein Residue
Map Locationscaffold_6: 806466.. 809419
Download Sequence
A.thaliana
AGI-codeAT5G03040.1
DescriptionIQ-domain 2
TAIR curator summary
Alias[iqd2][IQ-domain 2]
Gene coexpression
MR
MR Locus Description
11.4891 Ahg940449 cellulose synthase 5
13.1909 Ahg478059 auxin-responsive family protein
24.0832 Ahg942065 Endomembrane protein 70 protein family
24.8998 Ahg485280 Plant invertase/pectin methylesterase inhibitor superfamily
27.4226 Ahg488871 tubulin alpha-5
34.7851 Ahg489716 Phosphate-responsive 1 family protein
36.9324 Ahg476998 general regulatory factor 2
40.8901 Ahg480606 EXORDIUM like 5
41.821 Ahg474136 tubulin alpha-2 chain
43.4281 Ahg356713 3-ketoacyl-CoA synthase 20
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression