Detail



ID : Ahg487116

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487116|fgenesh2_kg.6__250__AT5G03415.1
Sequence
CTCTCTCATC GTGGACATCT TTTTCATCAT CGCACAAAAA CTCCGATCGA CTTATCCTCC TCCTTCTCCG GCGAATCTCT AAACTCTCTG ACGCGAAAAC CACCGTTCCA GAGAAGTATC ACACTAATAA ATCTAATGGT GATCCGCCAT TATTGAACCT TCTAATTCTC GTTAATATCC AAAAAAACCG AACTCGATTT TCAAGTAGCG GTTTGTGCGG GTAGTTAGTT TAGGTGGAAG AAGAATGACA ACTGGGTCTA ATTCTAATCA CAACCACCAT GACGATGGTT CCGGTAGAAG CAATAATAAT AACAATAACC CTAGTACTAG GTCTTGGGGC ACGGCGGTTT CAGGTCAATC TGTGTCTACT AGCGGCAGTA TGGGCTCTCC CTCGAGCCGG AGTGAGCAAA CCATCACCGT TGCTACATCT GCTAGCGATA GTACTTTTCT ACGCATGAAC AATTTGGACA TTCAAGGTGA TGATGCTGGT TCTCAAGGAG CTTCTGGCAT TAAGAAGAAG AAGAGGGGAC AGCGTGCGGC TGGTCCAGAT AAGAGTGGAA GAGGACTACG TCAATTTAGC ATGAAAGTTT GTGAAAAGGT GGAAAGCAAA GGAAGGACAA CTTACAATGA GGTTGCAGAC GAGCTTGTTG CTGAATTTGC ACTTCCAAAT AACGATGGAA CATCCCCTGA TCAGCAACAG TATGATGAGA AGAACATAAG ACGAAGAGTA TATGATGCTT TAAACGTCCT CATGGCTATG GATATAATAT CCAAGGATAA AAAAGAGATT CAATGGAGAG GTCTTCCTCG AACAAGTTTA AGCGACATTG AAGAATTAAA GAACGAACGG CTTTCACTTA GGAACAGAAT TGAGAAGAAA ACTGCATATT CCCAAGAACT GGAAGAACAA TATGTAGGCC TTCAGAATCT GATACAGAGA AATGAGCACT TATATAGCTC AGGAAATGCT CCCAGTGGTG GTGTTGCTCT TCCTTTTATC CTTGTCCAGA CTCGTCCTCA TGCGACAGTA GAAGTGGAAA TATCAGAAGA TATGCAGCTT GTGCATTTTG ATTTCAACAG CACTCCATTC GAGCTCCACG ACGACAATTT TGTCCTCAAG ACTATGAAGT TTTGTGATCA ACCGCCGCAA CAACCAAACG GTCACAACAA CAGCCAGGTG GTTTCTCACA ATTTCACGCC AGAAAACCCT AACGAAGGCC CCAGCACAGG TCCAGCGCCG CAGGCGGATA TGTACCAGTC TCATCTCCAA CCGCAACAAC ATGAGCAGCA TTCTCAGCTA CAAATCATTC GTACACCGGA GACTAACAAA GTTGCTTCCG CCGCTGATAC TGCTCCAGTG AAATCACCGT CGCTCCCAGG GATAATGAAC TCCAGCGTGA AGCCGGAGAA TTGAAACACG TATGAAGACC CTTGTACAAT TTCTGTAAAA CTGTAAAGTA GTTTTTTGAG GAATAGCCGG TTTAGCGGTA AATGTACCGG TGGTTTATCG AATCTAGGAT CGTACTCGGG TTTAGCGATT TTAAGAATCT TTGCAACACT TTGCTCTATG GTGTAGAAAT GAATTTTATT 
Length1590
Protein Sequence
Protein Residue
Map Locationscaffold_6: 936241.. 939162
Download Sequence
A.thaliana
AGI-codeAT5G03415.1
DescriptionTranscription factor DP
TAIR curator summaryEncodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost.
Alias[ATDPB][DPB]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg477087 ARM repeat superfamily protein
7.34847 Ahg490301 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
9.48683 Ahg936826 ribosomal protein L16
11.4018 Ahg492629 Ubiquitin C-terminal hydrolases superfamily protein
11.6619 Ahg329829 Tetratricopeptide repeat (TPR)-like superfamily protein
13.8564 Ahg479648 dentin sialophosphoprotein-related
18.3303 Ahg480516 proteasome family protein
18.8944 Ahg907740
25.3969 Ahg473899 exocyst complex component sec3A
25.923 Ahg898832 Integrin-linked protein kinase family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression