Detail



ID : Ahg487128

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487128|fgenesh2_kg.6__262__AT5G03520.2
Sequence
TAATCAACTT GTTTTCTTCA GCGAGCGACA TTGGAAGGAA GCATTTCATT AGCTTTTTCC TTTTTTTGCT GTCTCCAGAA ATAAAATTTC AATCTTTCGT CGGAAAAAAA AGAAGAAGAA GAAGAAGCAG AGTTGGGTTT AGTTTTTGCG GAGAAGCAAA GAGATCAATA AATTAGTGAG CTTTTTTCTC TTCTCTGCGA TGGCGGTTGC GCCGGCAAGA GCTCGTTCAG ACTATGATTA CCTCATCAAG CTTCTTCTCA TCGGCGATAG CGGTGTGGGG AAGAGTTGTT TGTTACTTCG ATTCTCTGAT GATACTTTCA CTACAAGTTT CATTACTACC ATTGGGTATA ATTGACTTCA AGATAAGAAC TGTTGAACTT GATGGGAAGC GTATCAAATT GCAGATATGG GACACTGCTG GTCAAGAACG TTTCAGAACT ATTACTACAG CGTATTACAG GGGAGCGATG GGTATATTGC TTGTCTACGA TGTAACGGAT GAGTCGTCTT TCAACAATAT TAGGAACTGG ATGAAGAACA TCGAGCAACA TGCCTCAGAT AATGTCAACA AAATATTGGT TGGTAACAAA GCTGATATGG ATGAAAGCAA AAGGGCTGTT CCAACAGCAA AGGGCCAAGC TTTGGCTGAT GAGTATGGAA TCAAATTCTT TGAGACGAGT GCCAAAACAA ACCTCAATGT CGAAAATGTT TTCCTTTCAA TCGCAAAAGA CATAAAACAA AGATTGACAG AAACCGATAC AAAAGCAGAG CCCCAAGGCA TCAAGATCAC CAAACAAGAT ACTGCCTCAT CATCTTCTGC AGCCGAGAAG TCAGCTTGCT GTAGTTACGT TTAGGAGTAT GATTGCTCTT TTTCGCCTGC ACCGGTTTTT TAATATCTGG CCATCTTTCT CATCTCTTAC GTCCCAAATC AGAGATAATT CTCATGTTGT TACCTAGAAC GAGTAGGAAA TCTCATTGAT GGTTGTGATC TTTATGTCTA ATTTGTTATC TCCATAATTC CTGTACAATG ATCTTCCTGA AATGGAAGAC TATGTTGGTC AAAAAACTAT GTTACAAAGA CTTTGAATTT ATGAAAAATG GAACTGTTGT AGTGTGT 
Length1117
Protein Sequence
Protein Residue
Map Locationscaffold_6: 994678.. 996663
Download Sequence
A.thaliana
AGI-codeAT5G03520.1
DescriptionRAB GTPase homolog 8C
TAIR curator summary
Alias[ATRAB-E1D][ATRAB8C][ATRABE1D][RAB-E1D][RAB8C][ARABIDOPSIS RAB HOMOLOG E1D][RAB GTPase homolog 8C][RAB HOMOLOG E1D]
Gene coexpression
MR
MR Locus Description
4.79583 Ahg491213 GTP binding protein beta 1
5.09902 Ahg936446 uridine kinase-like 2
7.48331 Ahg473428 tobamovirus multiplication 2A
15.4272 Ahg496212 PDI-like 1-4
17.2047 Ahg946720 vesicle-associated membrane protein 724
18.1659 Ahg323092 aldehyde oxidase 2
24.3311 Ahg490075 Phosphofructokinase family protein
30.0998 Ahg470417 cryptochrome 2
34.2053 Ahg491854 regulatory particle AAA-ATPase 2A
34.3948 Ahg482471 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression