| Annotation |
|---|
| Description | jgi|Araly1|487173|fgenesh2_kg.6__307__AT5G03940.1 |
| Sequence |
GAGAGTCATA AAAAGTTTTG AGCTTTGATC ACACTATTCA CTACTAATGG AGGCTCTGCA ATTTTCCAGC CATTTCTCCG TGAGTAGAGT TCCGAATTAT ACTCTAGGAA TTCGGAGAAG TAGAGCAACA TTTAGCTCTG CATTCACCGG TACCAGCAAT TCAGCTTCTC TCTCCTCTAG GAATCCCTCA ACGCGAGAGA TATGGAGTTG GGTGAAATCG AAGACTGTTG GTCAAGGAAG ATACAGAAGA AGCTATGTGA GAGCCGAGAT GTTTGGACAG TTGACTGGTG GACTCGAGGC TGCTTGGAGC AAACTCAAAG GCGAAGAGGT TTTGACCAAG GAGAATATTG CCGAACCAAT GCGAGATATT AGAAGAGCTC TCCTGGAAGC AGATGTGAGT CTCCCAGTTG TTAGAAGGTT TGTTCAATCT GTTAGTGACC AAGCCGTTGG AATGGGTGTC ATTCGTGGAG TTAAACCAGA TCAGCAATTG GTCAAGATTG TACATGATGA GCTAGTGAAA TTGATGGGTG GAGAAGTATC TGAGTTACAG TTTGCTAAAT CAGGCCCTAC GGTAATATTG TTGGCTGGAC TCCAAGGAGT TGGAAAGACA ACGGTTTGCG CTAAATTAGC TTGTTACCTA AAGAAGCAGG GAAAGTCTTG CATGCTTATT GCTGGAGATG TGTACCGACC TGCTGCCATC GATCAACTTG TCATTTTAGG TGAACAGGTT GGTGTGCCGG TTTATACAGC AGGGACTGAT GTCAAACCTG CAGATATAGC TAAGCAAGGT CTAAAAGAAG CTAAAAAGAA TAATGTTGAT GTAGTTATTA TGGATACTGC AGGGAGGCTT CAGATAGATA AAGGCATGAT GGACGAATTA AAAGATGTGA AGAGATTTCT GAATCCAACA GAAGTGTTAC TAGTTGTTGA TGCCATGACT GGACAAGAAG CTGCAGCACT GGTGACTACA TTCAATGTTG AGATAGGAAT CACAGGAGCC ATTTTGACAA AGCTAGATGG TGATTCAAGA GGTGGTGCTG CTTTGAGTGT CAAGGAGGTA TCGGGAAAAC CGATTAAACT GGTAGGACGT GGAGAGCGAA TGGAGGATCT TGAACCCTTT TATCCAGATC GAATGGCTGG ACGAATTCTA GGAATGGGAG ATGTGCTTTC ATTTGTAGAG AAGGCAACAG AAGTTATGCG TCAAGAAGAT GCTGAAGATC TACAGAAGAA GATAATGAGT GCAAAGTTCG ACTTCAACGA TTTCCTAAAG CAGACTCGTG CTGTTGCGAA AATGGGTTCG ATGACACGAG TTCTTGGAAT GATTCCCGGA ATGGGGAAAG TGAGTCCAGC ACAAATCCGA GAAGCGGAAA AGAATCTTTT AGTCATGGAA GCAATGATTG AAGTGATGAC ACCCGAGGAA AGGGAGAGAC CAGAGTTACT AGCAGAATCT CCAGAGAGAA GAAAAAGAAT CGCTAAAGAT TCAGGAAAGA CAGAACAGCA GGTGAGTGCA CTTGTAGCAC AAATCTTCCA AATGAGAGTA AAAATGAAGA ACTTGATGGG AGTAATGGAA GGAGGATCAA TTCCTGCATT AAGCGGTCTC GAGGACGCAT TGAAAGCAGA ACAAAAGGCT CCACCTGGAA CTGCAAGGAG GAAGAGAAAG GCGGACTCAA GGAAGAAATT TGTAGAGTCA GCATCAAGCA AGCCTGGTCC TCGTGGCTTC GGCTCTGGTA ACTAAAATTA TTTCAGTCCA GTTTGGTTAA TTTCAAAACG GATTATTTTT TTGTACAAGT TAATGAATGA GATATAAGAA TTC |
| Length | 1813 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1202731.. 1206044 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G03940.1 |
| Description | chloroplast signal recognition particle 54 kDa subunit |
| TAIR curator summary | mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit |
| Alias | [54CP][CPSRP54][FFC][SRP54CP][54 CHLOROPLAST PROTEIN][chloroplast signal recognition particle 54 kDa subunit][FIFTY-FOUR CHLOROPLAST HOMOLOGUE][SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT CHLOROPLAST PROTEIN] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.4164 |
Ahg492365 | 31-kDa RNA binding protein |
| 14.2829 |
Ahg474606 | chaperonin 60 beta |
| 19.1311 |
Ahg490441 | Ribosomal L5P family protein |
| 28.775 |
Ahg484358 | ribosomal protein L15 |
| 29.0689 |
Ahg495426 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 30.249 |
Ahg484572 | ribosomal protein L12-A |
| 31.9374 |
Ahg928524 | elongation factor P (EF-P) family protein |
| 32.0312 |
Ahg483405 | Ribosomal protein L3 family protein |
| 33.0454 |
Ahg930906 | NAD(P)-binding Rossmann-fold superfamily protein |
| 35.4401 |
Ahg348440 | chloroplast RNA-binding protein 29 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|