Detail



ID : Ahg348440

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|348440|fgenesh1_pg.C_scaffold_5001832
Sequence
ATGTCTGCCT CTGCTTCTTC TCTTTCTGCT TTCAACCCTA AATCCCTTCC TCTCTGCGTC TCCAGGCCAG CTTCCGTCTC CGTCTTACCT CCTTCCCTCT CCTTCAAACT TCATTCCGAC CATCTCGTCT CTCTCTTCGC TTCCTCCGCC GTGAAATGCT CATCCCCCGC CGAGTATCCG TCGCGTTTTG TTAGAAACGT TGCTGTATCT TCAGATTTCG AGGTGGAGGA AGATGATATG TTCGCTGACG GTGACGATTC GGCGCCTGTG GAGCGTAACT CCTTCTCTCC TGACCTCAAG CTCTTTGTTG GTAACCTTTC CTTTAACGTT GATAGCGCTC AGCTTGCTCA GCTCTTTGAG AGCGCCGGAA ATGTTGAGAT GGTTGAGGTA ATCTATGACA AAGTGACTGG ACGAAGCAGG GGTTTCGGAT TTGTGACAAT GTCTACCGCG GCAGAAGTTG AAGCAGCAGC TCAACAGTTC AATGGCTATG AATTTGAAGG CAGACCTTTG AGAGTCAATG CTGGCCCTCC TCCACCTAAA AGAGAGGAAT CCTTCTCCAG AGGACCAAGA AGTGGTGGTT ATGGTTCTGA ACGTGGTGGA GGCTACGGTT CTGAGCGTGG TGGTGGTTAC GGTTCTGAGC GTGGTGGTGG TTATGGTTCA GAGCGTGGTG GTGGATACGG GTCTCAGCGT AGTGGTGGTT ATGGAGGGTC TCAACGTTCC AGTTATGGTT CGGGGTCAGG TTCGGGCTCA GGTTCAGGAA ACCGTCTTTA CGTGGGCAAC CTTTCTTGGG GTGTTGATGA CATGGCCCTT GAGAACTTGT TTAATGAGCA AGGAAAGGTA GTTGAAGCCA GGGTTATCTA CGACAGGGAC AGCGGTAGAT CCAAGGGTTT TGGGTTTGTG ACACTCAGTT CTTCTCAAGA GGTTCAAAAG GCCATCAATT CCTTGAATGG TGCTGATTTG GATGGAAGAC AAATAAGAGT CTCGGAGGCT GAGGCTAGGC CACCAAGAGG CCAATTTTGA 
Length1020
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15686252.. 15687943
Download Sequence
A.thaliana
AGI-codeAT3G53460.4
Descriptionchloroplast RNA-binding protein 29
TAIR curator summaryEncodes a nuclear gene with a consensus RNA-binding domain that is localized to the chloroplast.
Alias[CP29][chloroplast RNA-binding protein 29]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg482714 RNA-binding (RRM/RBD/RNP motifs) family protein
2.23607 Ahg492365 31-kDa RNA binding protein
2.44949 Ahg326886 DEAD box RNA helicase (RH3)
3.16228 Ahg482332 Ribosomal protein S5 family protein
3.4641 Ahg474606 chaperonin 60 beta
5.91608 Ahg486312 ketol-acid reductoisomerase
6.40312 Ahg938119 chloroplast RNA-binding protein 33
7.74597 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
8.12404 Ahg473970 Ribosomal L18p/L5e family protein
8.7178 Ahg478562 GTP-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression