Detail



ID : Ahg487236

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487236|fgenesh2_kg.6__370__AT5G04540.1
Sequence
CGTATTTAGA TGTCTCATTG TCTTTGTGGC GAAAAGGCAG CGTGCTAAAT CCGTCCTTTG CCACCGTTGA GCGGCAGGTG AAGCCGAACC CGAATCACCG TCTCTCTCAT CTCTCTCTCC TTTTCAATGA CGGCGCTGAG ACCTCTCTCC GGGAGATCAC GATCGCTGCG ATGTTCGTCG GAGAAGATGG AAGGTACCGG AAGCTGGGAC GTACTTGAAT GGACTAAACT CGATTCAGCT TCTTGGTCAG GCTCGTATTC GAATTTGGAT TGCTTGCTGG AATCTGAGAG GATCATCTTC GAGGCTTGTG GAGTTATTCT CATTAACACC GATGAGGCAG GGACCCTCTT ATTGTCAAAT TTCCGTATTC TGTTTTTGAG TGAAGGAACC AGAAAGCTTA TTCCACTTGG TACAATTCCA TTTGTAGCTA TCGAGAAGTT TAACAAACTG GCGCTGAAAG TTCAAGCAAA CAAATATCAC AACAACGAGA ATGCACCGAC ACGACTTTTA CAGGTCACTG GAAAAGACAT GAGGATAGTT GTCTACGGTT TTCGACCTGG TACCAAGCAG AGACGTTCTG TAGTTGATGC GCTATTGAGG TGTAACAAAC CAGAGAGAGT ATGGGATCTG TATGCTTTCA CATGTGGGCC TTCCAAATTC GGTAACACAA ACCCAAAGGA AAGATTGCTT AATGAATATT TTCGGCTTCT TGGAAAAAGT TCACAACGAG CGTCAATGAA TATGATTGAA GACGGAACAT TCACTCTGTC CAATGACCTT TGGCGTATTA CTAACTTGAA CTCAAATTAT GACTTGTGTC AGAGTTATCC GTTTGCTTTG ATGGTTCCAA AATCCATTAG TGATGAAGAG CTGATCCAGA CGTCTACTTT CCGGGCAAGA TGTCGCTTAC CTGTGATCTC GTGGTGTCAT CCAGGAAGTG GAGCTGTGAT TGCTCGCTCA TCACAACCTT TAGTTGGTCT GATGATGAAC ATGAGGAGTA CCTCTGATGA GAAACTTGTC ACTTCATTCT GCACTCAATT AGCTGGTCAT AAGGGATCAC GAAGGAAGCT TTATATCGTA GATGCAAGAC CTAGGAAAAA TGCATTAGCA AATGGAGCAA AGGGAGGAGG CTCAGAATCA TCTTCAAATT ATTTGCAATC TGAAATTGTT TTTTTGGGGA TAGACAACAT ACATGCAATG AGAGAGAGTT TTTCCCGCCT TAGGGATTAT TTAGATATGC ATGGTACAAC ATCATCCGAT GGGACGTCAT CATTCTTGAG GCATGGTGGC TGGACGTGGG GTGGAGGTAA TCTCAGTAGT ATGTCGGCTT CAGTATCCTT GCTTGGAGAT AGTGGGTGGT TGAGTCACAT CCAGAGCATC TTAGCTGGTG TAGCATGGAT TGCTGCACGT GTTGCTATGG AGTCGGCATC AGTTCTCGTG CACTGCAGTG ATGGATGGGA CAGAACAACT CAGCTGGTTT CTCTTGCATG CTTATTGCTT GATCCATACT ACAGAACATT TTCTGGGTTT CAGGCTCTTG TCGAAAAGGA TTGGTTAGCA TTTGGTCACC CATTTTCGGA TCGAGTGGGA ATGCCTAACG TGTCTGAATC TGGTAATTTT GAATTACCAA TTCAGTCTTC TTCTGCTCGA AGTTTCCCTT CATCTCCAGT GCGGCAATCT CCAGGATCAG CAGCTGCTCA ATCTTCTAGC TCTTCATATG GGCTGAACAA CTATTCTCCT ATATTTTTGC AGTGGCTTTA TTGCGTTTCA CAGCTAATGC GGATGTATCC TTCTGCTTTC GAGTTTTCTC CGACTTTCCT GGTAGATTTC ACGGACTGCT TGCTTTCAGG TCGTTTTGGG AACTTTTTGT GTAATAGTGA AAAAGAGAGG CAGCAATGTG GGATTTCTGA AACCTGTGGA TGCCTTTGGG CCTACTTGGC CGATTTGCGT TCTTCCGGTG GAACTTCTCA TGTCCATTGT AATCCATTTT ATGATCCTTC AAGATATGAT GGCCCATTAT TACCTCCTGC AGCAGCTCTA GCCCCGACTC TCTGGCCCCA GTTCCATCTC CGGTGGGCCT GCCCTGTGGA GCCGAACGCC ACAGAAACCG AGGACCAATG TAGAGCCATG ACTGCTAAGT ATTCAGAAAT GAAGAAGGAG AAAGAAGAAG CAGAAAGGAA GGTAGACGAG TTATCTTCTG CAGTGGAATC ATTGAGCGAA GAGTTACTGA ACGAGAGAGA TATAAGCCAT GCAGCTAGAG AATCAGCAAA GAGAGCTACA AAAGAGCGTG CAGTCATATC ACGAGCTGTG CAGTCACTCG GCTGCAAAGT TAAATTCACA AAAAACGGAG ATTGCACAGT CGAAGTAGAA GATGGTCCAC GGAAATGTTC TCACTCAATT CCCCAAAAAC CATCTGAGGA TAACACAACA GATGTCTCAG AATCTATCTC ATCGGTGACT GAACAAAATG TTTGTGAAGC ATTGTGTCCG TTGCGTACAA GAGAAGGAAT GTGTCGACGG CCTGATGCGG GTTGTGCTCA GATCGGGAGC CAATTTCTTG GGTTAAAAAC AAACTTTGAG GCGTTTGATA ATCTCTGCGT CTACGACAGC TATTTCACAG CTGAATGAGA GTCCAAGTTT CACCAGATCG ACCCGAAATC ATGAACCTGT GTGTATTTTT TTTGACAGAG TAAGGCATAG CAAACAGCAA CAGAGGAACA GAATCATCAA TAAAACCCCA TTAAAAAGGC GGTACAAAAC CGCCAAACCA AGAGCGTTTT GGAAAGTGGG TGCGCATCGG GAACTAACTT CTTGTATAGC AATGCGATCA TGTATAGACT AGATAGGGTC TGCAGGTTGC TGGCTTCATT GAGAACGTTA GATTTGTGAT TTATTTTATT TTTGTTGGTT GATAAATGAT TTAAAAGATT GAAAGTTATG TACAATTTCT TAACGAATTT GTTGTAACTA AAACTGATTA TAGGATTATT GAGACAACAA CAGTTATTAT AATC 
Length3014
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1476953.. 1483119
Download Sequence
A.thaliana
AGI-codeAT5G04540.1
DescriptionMyotubularin-like phosphatases II superfamily
TAIR curator summary
Alias[AtMTM2][MTM2][myotubularin 2]
Gene coexpression
MR
MR Locus Description
6 Ahg484947 RNA binding (RRM/RBD/RNP motifs) family protein
6.48074 Ahg478624
6.9282 Ahg476847 tubby like protein 1
18.7083 Ahg482717 adenosine kinase
20.3961 Ahg479575 purple acid phosphatase 18
21.5407 Ahg491737 villin 4
25.2587 Ahg492472 UDP-D-glucose/UDP-D-galactose 4-epimerase 2
26.8328 Ahg911413
30.8545 Ahg470470 ubiquitin-specific protease 2
31.305 Ahg926973 VPS35 homolog B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression