| Annotation |
|---|
| Description | jgi|Araly1|926973|scaffold_202534.1 |
| Sequence |
CTGCTGACAC ACGGAGGAGA AGAGATGAGG ACGCTCGCCG GAGTAGAAGA CGAGGATAAG TGGCTGGCGG AAGGAATCGC CGGAATCCAG CACAACGCTT TCTTCATGCA TCGCGCTTTG GACGCGAATA ATCTCAGAGA AGTTCTCAAG TACTCTGCTC TGATGCTATC GGAGCTCCGA ACCTCCAAGC TCTCTCCTCA GAAATATTAC GATCTCTATA TGAGAGCTTT CGATCAATTG AGGCAGCTGG AGATTTTCTT CAAGGATGAG AGTAGGCATG GATTACCTGT GGTTGATTTG TATGAGCTTG TTCAACATGC CGGCAACATA TTGCCCAGGA TGTATCTGTT ATGTACGGTA GGGTCTGTGT ATATCAAAAG CCAGCAGGCT CCTTCTAAGG ATGTTCTTAA GGATCTTGTG GAAATGTGTC GAGGTGTTCA ACATCCCATT CGTGGCCTCT TTTTGAGGAG TTATCTTGCT CAAGTGAGCA GGGATAAGTT ACCTGAGATT GGCTCAGACT ACGAAGGAGA TGCGAATACT GTGATGGATG CTGTGGAGTT TGTGCTACAA AATTTCACCG AGATGAATAA GCTCTGGGTT CGAATACAGC ATCAGGGACC AGGAACAGTT CGAGAAAAGC AGGAGAAAGA GAGGAACGAA CTTCGTGATC TTGTTGGAAA AAATCTACAT GTTCTAGGAC AGATCGAAGG TGTTGACCTT GAGATGTACA AAGAGACTGT TCTTCCTAGG GTCTTAGAGC AGGTCGTCAA CTGTAAAGAT AAGCTGGCTC AGTATTATCT GATGGAGTGC ATAATTCAAG TCTTTCCTGA TGAGTATCAT TTGCAGACTC TTGAGGCCTT GTTGGCTGCT TGTACCCAAC TGATGCCAAC GGTTGACACC AAGATAGTGT TAACCCAACT AATGGACCGG TTGTCAAACT ATGCTGCCTC AAGTCCAGAT GTGTTACACG AATTTTTGCA AGTGGAAGCT TTTGCCAAAT TGAGCAATGC AATTGGAAAG GTGATAGATA CACAGCTTGA GATGCCTATT GTTGGAGCTA TGACTCTGTT TGTCTCTCTT CTGACTTTTA CTCTCCGAGT TCATCCTGAT CGGCTTGACT ATGTGGATCA AGTATTGGGT GCATGTGTAG TAAAGCTTTC CAGTGTGCCC AAGCTGGAGG ACGCCCGTGC AATGAAACAA GTAGTTGCAC TTCTGAGTGC TCCTTTAGAA AAGTACAGTG ACATAGTTAC AGCTCTTACA TTGTCAAATT ATCCACGTGT TATGGATCAT CTTGATGATG GAACGAACAA AGTAATGGCA ATGCTTATTA TTCAAAGTAT AATGAAAACT GATTCGTGTA TATCAACTGC TGATAAGGTT GAGGTGCTGT TTGAATTGAT AAAAGGACTT ATTAAAGATT TGGATGAAAC CAACGCGGAG GAGCTTGACG AGGAGGATTT CCAGGAGGAA CAAAATTCAG TAGCCCGTCT CATACATATG CTTGATAATG AAGAACCAGA GGAGATGCTA AAGATTATAT GTGTTGTGAG AAGGCATCTT ATGACAGGAG GACCTCGACG CTTGCCTTTT ACTGTTCCCC CACTTGTTTT TTCTGCTGTT AGGTTGGTGA GGCAGCTAGA ATCCCAGGGT GGAGATATAG CAGGAGAAGA TGTTCCAGCA ACCCCGAGAA AGATTTTTCA GATTCTCAAC CAGACAATCG AGGTTCTCTC CTCAGTTCCA TGTCCTGAAC TGGCTCTAAG GCTCTACCTC CAGTGCGCTG AGGCCGCAAG TGACTGTGAT CTTGAGCCTG TTGCTTATGA GTTTTTTACC CAAGCATTTA TATTATATGA GGAAGAAATT GCGGACTCCA AGGCACAGGT AACCGCGATT CATCTGATCG TTGGAACCTT GCAAAGGATC AATGTCTTTG GTATTGAAAA CAGGGACACC TTGACACATA AAGCAACCGG GTACTCAGCA AGGCTTCTTA AGAAGCCTGA TCAATGTCGA GCGGTTTATG CATGCTCTCA CCTCTTTTGG GTCGATGATC CAGATGGTAT TAAAGATGGA GAAAGAGTTC TTCTCTGTTT AAGACGTGCA CTGAGGATAG CAAACGCAGC TCAACAAATG GCTAGTGCAA CCAGAGGTAG CAGCGGACCA GTCACGCTGT TTGTCGAAAT CTTGAACAAG TACATTTACT TCTTTGAGAA AGGGAATCCA CATATCACTC CATCTGATAT ACAGAGCCTC ATAGAGTTAA TCAACAACGA GATGCAAAGC GACAACGGTA ACACGACAAT CCACTCAGAC CCGTTCTTTA CAAGTACATT GCGTTACATT AGGTTCATAA AACAGAAAGG TGGTTTGATG GGTGAGAAAT ATGACCCTAT CAAGTTGTGA CTTATATTCG CGACACAAGC CT |
| Length | 2422 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 15936947.. 15943119 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G75850.1 |
| Description | VPS35 homolog B |
| TAIR curator summary | |
| Alias | [VPS35B][VPS35 homolog B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.58258 |
Ahg494463 | Root hair defective 3 GTP-binding protein (RHD3) |
| 7.54983 |
Ahg494346 | disease resistance protein (TIR-NBS-LRR class) family |
| 13.9642 |
Ahg471977 | tetratricopeptide repeat (TPR)-containing protein |
| 14.0712 |
Ahg488294 | Transducin/WD40 repeat-like superfamily protein |
| 14.9666 |
Ahg487401 | DHFS-FPGS homolog B |
| 16.4317 |
Ahg473945 | calcium-dependent lipid-binding family protein |
| 21.0238 |
Ahg493120 | GATA transcription factor 26 |
| 22.6936 |
Ahg474272 | alpha-mannosidase 1 |
| 25.3969 |
Ahg909961 | |
| 26.2679 |
Ahg945962 | calcium-dependent protein kinase 15 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|