Detail



ID : Ahg487282

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487282|fgenesh2_kg.6__416__AT5G04950.1
Sequence
AAAAGATTAT TGATACTTAT CTTCTCTCCT GAAATAACCT CATAGTGTCG ACATGGCTTG CCAAAACAAT CTCGTTGTGA AGCAAATCGT CGACTTATAC GATCAAATCT CAAAGCTCGT GAGCTTAAAA CCTTCCAAAA ATGTCGACAC TTTGTTCGGA CAACTCGTGT CCACGTGCTT ACCCACGGAT ACAAACATCG ATGTCACAAA TATGTGTGAA GAAGTCAAAT ACATGAGATC TAATCTCATC AAGCTTTGTG GTGAAGCCGA AGGTTATTTA GAGCAACACT TCTCCACAAT TTTGGGATCT TTACAAGAAG ACCAAAACCC ACTTCACCAT TTACACATCT TTCCTTACTA CACCAACTAC CTCAAGCTAG GCAAGCTCGA GTTCGATCTC CTGAGTCAAC ACTCAAGCCA TGTCCCCACC AAGATTGCCT TCGTGGGTTC GGGTCCGATG CCTCTCACAT CCATCGTCTT GGCCAAGTTT CACCTCCCGA ACACGACCTT CCACAACTTC GACATCGACT CACACGCAAA CACACTCGCT TCAAACCTCG TCTCTCGCGA TCCGGACCTC TCAAAACGCA TGATCTTCCA CACAACGGAC GTACTAAACG CTACCGAAGG CCTTGACCAA TATGACGTCG TTTTCTTGGC GGCTCTTGTT GGGATGGACA AAGAGTCAAA GGTCAAAGCC ATTGAGCACT TGGAGAAACA CATGGCTCCT GGAGCTGTCC TTATGCTAAG GAGTGCTCAT GCTCTCAGAG CTTTCTTATA TCCCATCGTT GACTCTTCTG ATCTCAAAGG CTTTCAGCTC TTGACCATCT ATCATCCAAC CGATGATGTG GTTAACTCGG TTGTGATCGC ACGTAAGCTC GGTGGTTCGA CCACGACCGG GGTTAATGGT ACTCGTGGCT GCATGTTTAT GCCTTGTAAC TGCTCCAAGA TCCACGCGAT CATGAACAAC CGTGGTAAGA AGAATATAAT CGAGGAGTTT AGTGCCATCG AGTAAACAAA TAATTAATTG TATTAACACA TCTCTTTTCT TAAGATTGTG TTCATGTTTT TTGTCTTATA ATAACTGCTC TTTTCGTTTC ATGTCTTTTG TGTGTTTGGG CTACTTTTGT TAAGTATAAG TTTGTGAATT TAGAGTTCTT TGATCTCGTT TTGTACGAAG ATACAGAACC CTTTGCTTGT TGTACTAATA AAAAAGCATA TCTTGAGA 
Length1228
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1666670.. 1667931
Download Sequence
A.thaliana
AGI-codeAT5G04950.1
Descriptionnicotianamine synthase 1
TAIR curator summaryEncodes a nicotianamide synthase.
Alias[ATNAS1][NAS1][ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1][nicotianamine synthase 1]
Gene coexpression
MR
MR Locus Description
12 Ahg942693 RING/U-box superfamily protein
13.7113 Ahg901205 FBD-like domain family protein
14.1421 Virus1880
15.2315 Virus0121
20.3961 Ahg927808
27.9285 Virus3629
30.5941 Virus2180
31.6386 Ahg905965
32.311 Ahg930135 Cysteine-rich protein
32.45 Ahg358516 Plant thionin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression