Detail



ID : Ahg487312

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487312|fgenesh2_kg.6__446__AT5G05210.1
Sequence
AAACCCTAAC CACTTTCACG GAACCTCCTC TTCTTCTTCG TCTCTCTGTC TTCTTCTCTC AACGCCGTTG ATTCGCCATC GTCGCTACAG GTGATTGTCT TGAGGTTTCC GACTTTTTGG CTAATCTCCT CTGTGGAGAG CAATGACTAA AACTCGTGGG ACTGATATGG CAAAGAAGAA GGGTAAACGT GATTCTGGAT TGGATTTCAA GACTCATCAG CATACTGAAT TTTTCGATAA GTTGATAGAG CTCATCCCTG CAAGATTCTA CTTACCTGAT GAGACAGAAA GAAAATGGTT TCCAGGTCTT AGCAAGGCTC GAAAAGCTAA AGCCAAGAAA ATAACAAATG AAAACCTAAA GAAGGCGAAG AGAGATAAGT TGGACCCAGA GAAGTCTGCT TTGACGACTC TTGATTTACT GAAGGAGAAG ATAGAGAAGG AAAGATTGGC TTCACTGAAG CAGAAGCAAA AGAAGAAACA CGCGGATTTA CGGAAGCAGA AGTTTGACCG GCAAAACTCT GGTACTGAGC TTCCTGATGA TGACAGTGAG GAGGAAACAG ACAACAACAG ACAAAAGGAT CATCAATCTG TTACGTACGA AGAGCTGAGG CAACGTCTCC ACCGCAAAAT TGATGAGCTC AAAGGTGGTC GTGGAGGTTC AGATAGACCA AGAAGCAATG AGAGAAGGAA GAAGATTCTG CCAAATAAGA GAAAGAGGGA TACAGTTTCT GAGGAGAAGA CAGTGGAGGA AAAGAAGTCA GCAGATAAAG GTAAGGGTAA GTTGGATGTG GAGGAGGCTG CTAAGGACCT TACATTTGGT TACGTCAAGA TTGATGACGA TGAAGAACAC GGAAAAGAGA AAAAGAAACG GAGGCTTTCA AAGGCAAAAG AACTTGAAAG GGCTATGAAG TTAGAGGATG CAAAGAAGGA TCCAGAAAAA GGAGATGTAA TTGCAAAGAA GCACTCATGG AAGGCAGCTA CAAGCAGGGC AGCTGGTATC AAGGTTCATG ATGACCCAAA GCTATTGAAG CAAAGCATCC ACAAAGACAA GAAGAGGCAC GAGAAGAACG CAGAGAAGTG GAAAGAGAGA GTTGAAGGGC AACAAAAGTT CAAGGTGGAG AAGCAGCAAA AGAGATCAGG GAATATTGCC GATAGGATTG AACAAAATAA GATGCGGAAA ATCGCCAAGA GAGAGAAAAA GCTCCTGCGT CCTGGCTTTG AAGGCCGCAA AGAAGGGTTT ATCAATGAAG GTGGAAACTA AAATTCAAAT CTTCCATACG CCTTTTGTGT TCCAACATTT CAACGATGTG ATCCTCACAA AGGCTGTGAA GAGGGTTTGC ACATCTGAAA TAGAAAAACA TCTTTTACCA TTTTGGGAAT TTTCATCTAG TCAAGTCCCT AGCTATATCT TTTATCTTTT AGTTCGTTTT CTTTTGCAGT TTGTAGACTT ATCAGATGTT CCATTTGCTA CTCAATGTGT TGTTGCTTAC AGTGAATGCT CTTATCAGGC AGGTTTT 
Length1517
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1821044.. 1823331
Download Sequence
A.thaliana
AGI-codeAT5G05210.1
DescriptionSurfeit locus protein 6
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg895753 HSP20-like chaperones superfamily protein
4 Ahg496951
6.32456 Ahg940041 DnaJ domain ;Myb-like DNA-binding domain
6.78233 Ahg472456 Endoplasmic reticulum vesicle transporter protein
8.06226 Ahg487865 RNA-binding (RRM/RBD/RNP motifs) family protein
8.88819 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
9.32738 Ahg916256 KRR1 family protein
12.49 Ahg471093 shaggy-like protein kinase 41
13.2288 Ahg479051 NUP50 (Nucleoporin 50 kDa) protein
13.4907 Ahg933740 RAP
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression