Detail



ID : Ahg487363

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487363|fgenesh2_kg.6__497__AT5G05610.2
Sequence
TTGTCTATCT CTACCTCTCT TGTCCGTGCG CATCGGATTT TGGAAACCAT TGATGCAGAC CTCAATCCAT CTCTAACACC ACTGATCTAT CTACTTAGGT CTTCTCTAAC GATACTCGTA ACTTTTTTAC TTTGCTTCTT CCCTTACTAC ATCGATGGCC GCTGAGTCTT CTAACCCTCG CACCGTCGAA GAGATCTTCA AGGATTTTAG CGGTCGTCGC TCCGGTTTTC TTCGAGCTCT CTCCGTAGAT GTTGACAAGT TCTACTCTTT ATGCGATCCG GAAATGGAGA ATCTGTGTTT GTACGGACAC CCAAATGGGA CATGGGAAGT GAATCTTCCG GCGGAGGAAG TGCCTCCGGA GCTACCTGAG CCAGCTCTTG GAATCAATTT CGCAAGAGAT GGTATGCAGC GTAAAGATTG GCTCTCTTTA GTTGCTGTCC ACAGTGACTG TTGGTTACTC TCTGTTTCTT CTTACTTCGG CGCTCGCCTT AATCGCAATG AGAGGAAACG CCTATTTAGT CTGATCAACG ATCTCCCAAC TCTCTTTGAA GTAGTGACGG GTAGGAAGCC CATCAAAGAT AATAAACCAA GCATGGATCT CGGAAGCAAA TCCAGAAACG GCGTTAAGAG ATCAATTGAA GGGCAGACAA AGAGCACGCC GAAACTAATG GAAGAGAGCT ACGAAGATGA AGACGATGAG CATGGAGACA CACTCTGTGG AAGTTGTGGA GGAAACTACA CAAACGACGA GTTCTGGATA TGTTGTGATG TGTGTGAACG TTGGTACCAT GGGAAGTGTG TGAAGATAAC ACCAACCAAA GCAGAGAGCA TCAAGCAATA CAAATGCCCT TCTTGCTGCA CTAAGAAAGG AAGACAGTGA GTGAATGAGT GAATTCTCAA AATAAGGGCG TTTTGAATTA GTAGTGAGAC ATGGAGAGAG TCATAAAGAC ACCACCAGCT GGTTAGAGAA CTTCGTCAAC TTTTGATCAA ATATGCCATG TGTTTGTATA TGTAGCGACT CTACTTTCAT TAGTTTATGT GTATTCTTAT GTAAGGTTGA TCTTCATAAT CTCTCATATG GTGTTTT 
Length1087
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1980618.. 1982872
Download Sequence
A.thaliana
AGI-codeAT5G05610.1
Descriptionalfin-like 1
TAIR curator summaryAL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.
Alias[AL1][alfin-like 1]
Gene coexpression
MR
MR Locus Description
1 Ahg934986 S-formylglutathione hydrolase
4 Ahg472958
4.24264 Ahg477754 Protein prenylyltransferase superfamily protein
5.2915 Ahg495211 PLAC8 family protein
8 Ahg492116 small ubiquitin-like modifier 1
12.1244 Ahg950176 RAN GTPase 3
12.3288 Ahg482091 ARM repeat superfamily protein
14.4222 Ahg356484 beta-amylase 2
15.5563 Ahg485482 VPS35 homolog C
15.8745 Ahg474346 protein kinase family protein / C-type lectin domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression